Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473334: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322432' containing sample 'M2203'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 646.3M bases, 258.8Mb downloads

UUID: 84b3181c-6c93-4d37-af3d-4c0f8f7544cf

Design: Illumina sequencing of Mycobacterium tuberculosis M2203 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235782 • SRP038370 • All experiments • All runs

Sample:

SAMN02599116 • SRS559664 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2203

Library:

Name: Pond-322432

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485238.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5L3

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57842

research_project: RP-114

root_sample_id: SM-4P8UG

sample_id: SM-5G5L3

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 646.3M bases, 258.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172787	1,594,770	322.1M	128.8Mb	2014-02-20
SRR1175088	1,604,664	324.1M	130.1Mb	2014-02-24

ID:: 653824

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