Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473294: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322762' containing sample 'M2898'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.5M spots, 496.5M bases, 187Mb downloads

UUID: 3e69c011-684b-42ba-8cea-8fdcbc305903

Design: Illumina sequencing of Mycobacterium tuberculosis M2898 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235847 • SRP038346 • All experiments • All runs

Sample: Sample from Mycobacterium tuberculosis M2898

SAMN02599181 • SRS559628 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2898

Library:

Name: Pond-322762

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485266.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5WA

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57919

research_project: RP-114

root_sample_id: SM-4PA45

sample_id: SM-5G5WA

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.5M spots, 496.5M bases, 187Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172738	1,221,245	246.7M	93.1Mb	2014-02-20
SRR1172979	1,236,866	249.8M	93.9Mb	2014-02-20

ID:: 653784

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