Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473280: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322749' containing sample 'H3361'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 464.9M bases, 193.9Mb downloads

UUID: 31f51a20-d596-4bf6-aadc-f10502d40bc9

Design: Illumina sequencing of Mycobacterium tuberculosis H3361 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235831 • SRP038338 • All experiments • All runs

Sample:

SAMN02599165 • SRS559620 • All experiments • All runs

Organism: Mycobacterium tuberculosis H3361

Library:

Name: Pond-322749

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485253.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5VW

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57918

research_project: RP-114

root_sample_id: SM-4PA43

sample_id: SM-5G5VW

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 464.9M bases, 193.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172722	1,141,244	230.5M	96.3Mb	2014-02-20
SRR1172840	1,160,011	234.3M	97.5Mb	2014-02-20

ID:: 653770

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