Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473281: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322354' containing sample 'M1956'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 466.8M bases, 184.6Mb downloads

UUID: 3c89cec8-7706-40c8-92fa-ce5624a39c79

Design: Illumina sequencing of Mycobacterium tuberculosis M1956 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235744 • SRP038336 • All experiments • All runs

Sample:

SAMN02599079 • SRS559618 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1956

Library:

Name: Pond-322354

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485160.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5IU

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57814

research_project: RP-114

root_sample_id: SM-4P8TE

sample_id: SM-5G5IU

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 466.8M bases, 184.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172723	1,151,990	232.7M	91.9Mb	2014-02-20
SRR1175174	1,159,070	234.1M	92.7Mb	2014-02-24

ID:: 653771

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity