Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473273: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322776' containing sample 'H1578'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 398.2Mb downloads

UUID: c54af9e8-c334-48c5-a3df-8c825850f650

Design: Illumina sequencing of Mycobacterium tuberculosis H1578 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235817 • SRP038329 • All experiments • All runs

Sample:

SAMN02599151 • SRS559611 • All experiments • All runs

Organism: Mycobacterium tuberculosis H1578

Library:

Name: Pond-322776

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485280.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5WO

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57906

research_project: RP-114

root_sample_id: SM-4PA3O

sample_id: SM-5G5WO

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 398.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172715	2,553,553	515.8M	198.3Mb	2014-02-20
SRR1173116	2,585,380	522.2M	199.9Mb	2014-02-20

ID:: 653763

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