Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473264: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322791' containing sample 'H3004'
2 ILLUMINA (Illumina HiSeq 2000) runs: 1.6M spots, 322.4M bases, 128.8Mb downloads

UUID: 37c44fc2-3d60-412e-b109-1bf3db4fb33c

Design: Illumina sequencing of Mycobacterium tuberculosis H3004 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235827 • SRP038323 • All experiments • All runs

Sample:

SAMN02599161 • SRS559605 • All experiments • All runs

Organism: Mycobacterium tuberculosis H3004

Library:

Name: Pond-322791

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485295.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5X4

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57914

research_project: RP-114

root_sample_id: SM-4PA3Y

sample_id: SM-5G5X4

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 1.6M spots, 322.4M bases, 128.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172709	803,256	162.3M	64.7Mb	2014-02-20
SRR1173036	792,758	160.1M	64.1Mb	2014-02-20

ID:: 653754

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