Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468426: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320028' containing sample '2099HD' from individual '1720407TD'
1 ILLUMINA (Illumina HiSeq 2000) run: 5.9M spots, 1.2G bases, 571Mb downloads

UUID: b67d9c14-f319-475d-8bb8-65811b283e9b

Design: Illumina sequencing of Mycobacterium tuberculosis 2099HD via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - Romania

PRJNA233365 • SRP037413 • All experiments • All runs

Sample:

SAMN02567713 • SRS555850 • All experiments • All runs

Organism: Mycobacterium tuberculosis 2099HD

Library:

Name: Pond-320028

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 475459.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5DINU

material_type: DNA:DNA Somatic

product_order: PDO-2742

product_part_number: P-WG-0004

project: G57247

research_project: RP-114

root_sample_id: SM-4MHX2

sample_id: SM-5DINU

work_request: 39898

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 5.9M spots, 1.2G bases, 571Mb

Run	# of Spots	# of Bases	Size	Published
SRR1166100	5,861,032	1.2G	571Mb	2014-02-10

ID:: 648614

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity