Pacbio reads from Skeletonema marinoi strain ST54 metagenome which ma... - SRA

SRX6413253: Pacbio reads from Skeletonema marinoi strain ST54 metagenome which map to the Rhodobiaceae bacterium strain SMS8 genome assembly (mapping performed using SMRT Portal v2.3.0's P_Mapping module)
1 PACBIO_SMRT (PacBio RS II) run: 76,064 spots, 306.4M bases, 185.3Mb downloads

Design: PacBio RSII sequencing of sample from diatom metagenome, in 22 SMRT cells, followed by mapping of reads to the subsequent assembly of Rhodobiaceae bacterium strain SMS8 from this data

Submitted by: University of Gothenburg

Study: Bacterial species found in association with the diatom Skeletonema marinoi

PRJNA380207 • SRP102656 • All experiments • All runs

show Abstracthide Abstract

Genome sequencing and assembly of bacterial species found in association with the diatom Skeletonema marinoi, with a view to understanding the interactions between the bacteria and their host.

Sample: Rhodobiaceae bacterium strain SMS8, associated with a culture of Skeletonema marinoi strain ST54

SAMN09453063 • SRS5070255 • All experiments • All runs

Organism: Rhodobiaceae bacterium

Library:

Name: RhodoSMS8

Instrument: PacBio RS II

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 76,064 spots, 306.4M bases, 185.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR9651706	76,064	306.4M	185.3Mb	2019-07-11

ID:: 8496702

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