Whole genome Illumina NextSeq sequence of Salmonella enterica subsp. ... - SRA

SRX3675839: Whole genome Illumina NextSeq sequence of Salmonella enterica subsp. enterica serovar Dublin
1 ILLUMINA (NextSeq 500) run: 4.8M spots, 1.2G bases, 490.1Mb downloads

External Id: EXT00296135

Design: NextSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: GenomeTrakr Project: US Food and Drug Administration

PRJNA186035 • SRP018785 • All experiments • All runs

show Abstracthide Abstract

Currently encompasses whole genome sequencing of cultured pathogens as part of a surveillance project for the rapid detection of outbreaks of foodborne illnesses

Sample:

SAMN06333755 • SRS2936911 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Dublin

Library:

Name: Nextera XT library SEQ000057101

Instrument: NextSeq 500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward251 reverse