MiSeq of human metagenome:Vaginal swab low grade squamous intraepithe... - SRA

SRX3534154: MiSeq of human metagenome:Vaginal swab low grade squamous intraepithelial lesion
1 ILLUMINA (Illumina MiSeq) run: 443,826 spots, 96.3M bases, 67Mb downloads

Design: samples were treated with detergent to lyse cells, treated with benzonase to digest unprotected DNA, run through iodixanol gradient to enrich for viruses, DNA isolated and rolling circle amplification performed prior to library preparation

Submitted by: National Cancer Institute

Study: Survey of single and double stranded DNA non-enveloped viruses on the skin of WHIM patients, healthy controls and other immune compromised patients

PRJNA396064 • SRP128102 • All experiments • All runs

show Abstracthide Abstract

Survey of unknown HPV types in the skin of WHIM patients, healthy controls and other immune compromised patients

Sample:

SAMN08296101 • SRS2809426 • All experiments • All runs

Organism: human metagenome

Library:

Name: W02

Instrument: Illumina MiSeq

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM