MiSeq of human metagenome:Skin swabs from lesions resembling rashes o... - SRA

SRX3534087: MiSeq of human metagenome:Skin swabs from lesions resembling rashes on L sole of foot, R knee, R palm of hand, R wrist, clear skin from R thigh
1 ILLUMINA (Illumina MiSeq) run: 3.4M spots, 651M bases, 387.1Mb downloads

Design: samples were treated with detergent to lyse cells, treated with benzonase to digest unprotected DNA, run through iodixanol gradient to enrich for viruses, DNA isolated and rolling circle amplification performed prior to library preparation

Submitted by: National Cancer Institute

Study: Survey of single and double stranded DNA non-enveloped viruses on the skin of WHIM patients, healthy controls and other immune compromised patients

PRJNA396064 • SRP128102 • All experiments • All runs

show Abstracthide Abstract

Survey of unknown HPV types in the skin of WHIM patients, healthy controls and other immune compromised patients

Sample:

SAMN08296132 • SRS2809360 • All experiments • All runs

Organism: human metagenome

Library:

Name: W20a

Instrument: Illumina MiSeq

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM