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SRX3466580: Amplicon sequencing of insect-associated fungi
1 ILLUMINA (Illumina MiSeq) run: 49,005 spots, 28.1M bases, 13.2Mb downloads

Design: Illumina tag screening of the V3-V4 hypervariable regions of the 16S rRNA gene
Submitted by: KAUST
Study: Honeybee fungal community across gut compartments
show Abstracthide Abstract
The gut fungal microbiome of honeybee (Apis mellifera) was investigated to evaluate the composition and spatial organization in different gut portions. Adult foragers were collected in the late summer from experimental apiaries located at DISAFA (University of Turin, Italy). Microbiological analyses were performed on the dissected guts compartments (i.e. crop, midgut, ileum and rectum) of honeybee workers. High-throughput sequencing of ITS2 region were used to investigate the fungal communities associated to the gut compartments of this insect.
Sample:
SAMN08166798 • SRS2754370 • All experiments • All runs
Organism: gut metagenome
Library:
Name: R5
Instrument: Illumina MiSeq
Strategy: RNA-Seq
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 49,005 spots, 28.1M bases, 13.2Mb
Run# of Spots# of BasesSizePublished
SRR637125249,00528.1M13.2Mb2019-01-31

ID:
4827870

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