Whole genome Illumina NextSeq sequence of Salmonella enterica subsp. ... - SRA

SRX3385274: Whole genome Illumina NextSeq sequence of Salmonella enterica subsp. enterica serovar Typhimurium
1 ILLUMINA (NextSeq 500) run: 3.3M spots, 962.7M bases, 438.2Mb downloads

External Id: EXT00283234

Design: NextSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: GenomeTrakr Project: US Food and Drug Administration

PRJNA186035 • SRP018785 • All experiments • All runs

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Currently encompasses whole genome sequencing of cultured pathogens as part of a surveillance project for the rapid detection of outbreaks of foodborne illnesses

Sample:

SAMN08015904 • SRS2680746 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Typhimurium

Library:

Name: Nextera XT library SEQ000063414

Instrument: NextSeq 500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward251 reverse