454 sequencing from individual filament of segmented filamentous bact... - SRA

SRX202946: 454 sequencing from individual filament of segmented filamentous bacteria SFB-3
1 LS454 (454 GS FLX Titanium) run: 118,503 spots, 72.7M bases, 155.7Mb downloads

Submitted by: STANFORD UNIVERSITY

Study: Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-3.

PRJNA69901 • SRP017080 • All experiments • All runs

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Isolation of five individual segmented filamentous bacteria (SFB, Candidatus Arthromitus, Clostridiaceae) filaments from a fecal sample from a BALB/c SFB-monocolonized mouse on a microfluidic chip using laser-tweezers. Cells were lyzed, their genomes amplified, and sequenced. Assemblies were obtained for each individual SFB metagenome, and a co-assembly was obtained based on combining the reads from the five individual metagenomes.

Sample: Candidatus Arthromitus sp. SFB-3 single filament from mouse

SAMN00630894 • SRS213091 • All experiments • All runs

Organism: Candidatus Arthromitus sp. SFB-3

Library:

Instrument: 454 GS FLX Titanium

Strategy: WGA

Source: GENOMIC

Selection: other

Layout: SINGLE

Spot descriptor:

5 forward

Runs: 1 run, 118,503 spots, 72.7M bases, 155.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR618494	118,503	72.7M	155.7Mb	2012-11-21

ID:: 270316

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