Metatranscriptomics of microbial phototropic mat growing at 58 centig... - SRA

SRX2739740: Metatranscriptomics of microbial phototropic mat growing at 58 centigrades
1 ILLUMINA (Illumina HiSeq 2000) run: 33.1M spots, 4.1G bases, 1.9Gb downloads

Design: Microbial mats growing at 66 58 and 48 °C were sampled using a cork borer with a diameter of 7 mm. Cores 1 cm thick were collected in triplicate at noon (12:00 h PM) for DNA and RNA (metagenomic/metatranscriptomic) analyses.

Submitted by: Beatriz Diez lab at Pontificia Universidad Catolica de Chile

Study: Phototropic microbial mat metagenomics and metatranscriptomic over a temperature gradient in Porcelana hot springs (Chile, Los lagos)

PRJNA382437 • SRP104009 • All experiments • All runs

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Here we use a metagenomic and metatranscriptomics approach over a temperature gradient in Porcelana Hot Spring to characterize the microbial and viral community of a phototropic microbial mat.

Sample:

SAMN06706423 • SRS2126774 • All experiments • All runs

Organism: hot springs metagenome

Library:

Name: P58RNAD

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: METATRANSCRIPTOMIC

Selection: size fractionation

Layout: SINGLE

Runs: 1 run, 33.1M spots, 4.1G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR5451029	33,101,184	4.1G	1.9Gb	2017-12-31

ID:: 3948254

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