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SRX2641143: WGS on Flavonifractor_plautii_An248
1 ILLUMINA (NextSeq 500) run: 7.8M spots, 1.9G bases, 830.3Mb downloads

Design: Nextera XT running on NextSeq 500
Submitted by: Veterinary Research Institute
Study: Whole genome sequencing of chicken gut anaerobes
show Abstracthide Abstract
A necessary step in the understanding a function of gut microbiota is to obtain gut anaerobes in pure cultures, sequence them completely, predict their characteristic features and use them in all downstream experiments. In this study we therefore cultured and sequenced isolates from chicken caecum among which we identified isolates belonging to 6 different phyla including Firmicutes, Bacteroidetes, Actinobacteria, Proteobacteria, Verrucomicrobia, Elusimicrobia and Synergistetes.
Sample: cultured from healthy chicken ceacum
SAMN06473680 • SRS2048662 • All experiments • All runs
Name: An248
Instrument: NextSeq 500
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 7.8M spots, 1.9G bases, 830.3Mb
Run# of Spots# of BasesSizePublished


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