ORCHID ENDOPHYTE - SRA

SRX2247652: ORCHID ENDOPHYTE
1 ILLUMINA (Illumina MiSeq) run: 25,091 spots, 15M bases, 10.6Mb downloads

Design: ITS2 region amplification of orchid root endophyte using ITS4/ITS86F primer pair.

Submitted by: Universidad Tecnica Particular de Loja

Study: Root associated fungi Raw sequence reads

PRJNA344001 • SRP090629 • All experiments • All runs

This project aimed to evaluate the diversity and community structure of fungal communities associated to orchid roots, specifically how these fungi communities are structured and the factors that could determine the community structure.Studies focused in the biodiversity of fungal associated to orchid rroots are still scarce and even less in epiphytic orchid of tropical rainforests.

Sample: Orchid endophytes

SAMN05880466 • SRS1747923 • All experiments • All runs

Organism: root metagenome

Library:

Name: CM 137.gz

Instrument: Illumina MiSeq

Strategy: OTHER

Source: METAGENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 25,091 spots, 15M bases, 10.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR4425726	25,091	15M	10.6Mb	2016-10-21

ID:: 3297199

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