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SRX1688198: Gardnerella vaginalis 23-12
2 ILLUMINA (Illumina MiSeq) runs: 3.7M spots, 1.1G bases, 658.8Mb downloads

Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample: Gardnerella vaginalis 23-12
SAMN04625558 • SRS1382740 • All experiments • All runs
Name: G. vaginalis 23-12
Instrument: Illumina MiSeq
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward151  reverse

Runs: 2 runs, 3.7M spots, 1.1G bases, 658.8Mb
Run# of Spots# of BasesSizePublished


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