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SRX1667871: Salinispora tropica CNT-250
1 ILLUMINA (Illumina HiSeq 2000) run: 22.8M spots, 3.4G bases, 2.1Gb downloads

External Id: JGI-SRA-5331
Submitted by: DOE Joint Genome Institute (JGI)
Study: Salinispora tropica CNT250 Genome sequencing and assembly
show Abstracthide Abstract
Multiplexed sequencing for secondary metabolite discovery: the goal of this project is to generate draft genome sequences for 144 or more cultured marine actinomycetes. The focus is on the genus Salinispora, which has proven to be a rich source of unusual secondary metabolites. Multiple strains derived from different locations will provide opportunities to assess the ¿secondary metabolome¿ of a well-defined bacterial lineage and to better understand pathway evolution and how it generates structural complexity. This project provides a unique opportunity to apply genome-mining approaches to natural product discovery and to use population genomics to explore fundamental questions related to the ecology and evolution of bacteria.
Sample:
SAMN02953002 • SRS1365987 • All experiments • All runs
Library:
Name: POPC
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol: Regular (DNA)
Runs: 1 run, 22.8M spots, 3.4G bases, 2.1Gb
Run# of Spots# of BasesSizePublished
SRR330790922,844,4543.4G2.1Gb2016-04-03

ID:
2393570

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