Transcriptome of B. rapa - SRA

SRX1654312: Transcriptome of B. rapa
1 ILLUMINA (Illumina HiSeq 2000) run: 5.7M spots, 2.9G bases, 1.5Gb downloads

Design: Sample taken from the second youngest leaf 20 days after germination. Total RNA was isolated using the PureLinkTM RNA Mini Kit (Invitrogen, USA). RNA sample was qualified and quantified by a Nanodrop 1000 spectrophotometer (Nanodrop Technologies, USA). Double-stranded cDNA were synthesized according to the manufacturer’s protocol of the Maxima H Minus Double-Stranded cDNA Synthesis Kit (Thermo, Lithuania) and purified by the GeneJET PCR Purification Kit (Thermo, Lithuania).

Submitted by: University of Arizona

Study: Brassica rapa Transcriptomic population study

PRJNA313067 • SRP072186 • All experiments • All runs

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This study focuses on the population subdivision and the level of founder effect in different cultivar species. We ask whether the level of founder effect varies among independent domestication events.

Sample:

SAMN04543340 • SRS1355126 • All experiments • All runs

Organism: Brassica rapa

Library:

Name: PI 662760

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 5.7M spots, 2.9G bases, 1.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR3280632	5,709,846	2.9G	1.5Gb	2017-02-28

ID:: 2373011

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