U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX14596148: SteCroix_00085_metag
1 ILLUMINA (Illumina NovaSeq 6000) run: 18.9M spots, 5.7G bases, 1.8Gb downloads

Design: Nextera XT
Submitted by: National Research Council Canada
Study: Wetlands oil remediation Raw sequence reads
show Abstracthide Abstract
In 1999 a wetland close to Ste. Croix de Lotibiniere (Quebec, Eastern Canada) and located along the St. Lawrence River was the site of a simulated oil spill. Test plots were set up, contaminated with crude oil and subsequently used to test natural attenuation, nutrient amendment or vegetation cropping as remediation treatments. In 2020, this study revisited the former test plots to investigate any lingering effects of the original Ste. Croix study. Test plot sediments and control sediments featured detectable quantities (75 - 165 g/kg) of mid-chain n-alkanes (C10-C36), but no other kinds of hydrocarbons. Differences in hydrocarbon, total organic carbon, nitrogen and phosphorous content were not significantly different between test plot sediments and control sediments. A microbial analysis did not detect significant differences in microbial load, microbial diversity or microbial community composition between test plot sediments and control sediments. Key genes for the aerobic and anaerobic degradation of n-alkanes as well as for the aerobic degradation of polycyclic aromatic hydrocarbons were detected in all sediment samples. Abundances of these genes did not differ significantly between formerly oil-contaminated sediments and control sediments. This study shows that after 21 years, previously oil-contaminated sediments of the Ste. Croix wetland can be considered completely remediated irrespective of the performed remediation treatment.
Sample: SteCroix_00085_metag
SAMN26892238 • SRS12365653 • All experiments • All runs
Library:
Name: SteCroix_00085_metag
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: METAGENOMIC
Selection: unspecified
Layout: PAIRED
Runs: 1 run, 18.9M spots, 5.7G bases, 1.8Gb
Run# of Spots# of BasesSizePublished
SRR1846384718,883,9775.7G1.8Gb2022-03-25

ID:
20845212

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...