DNA-seq of Pseudomonas aeruginosa: Sample WH-SGI-V-07406 - SRA

SRX1437147: DNA-seq of Pseudomonas aeruginosa: Sample WH-SGI-V-07406
1 ILLUMINA (Illumina HiSeq 2500) run: 3.3M spots, 823.4M bases, 566.8Mb downloads

Design: "Paired-end libraries were prepared using KAPA kits according to the manufacturer’s instructions. The reads presented here have undergone adapter trimming. The reference to which the reads were aligned may differ slightly from the version in GenBank, but the reads themselves (both aligned and unaligned) are accurate."

Submitted by: Synthetic Genomics Vaccines, Inc.

Study: Pseudomonas aeruginosa Genome sequencing and assembly

PRJNA297679 • SRP066369 • All experiments • All runs

show Abstracthide Abstract

Genome sequencing and assembly of Pseudomonas aeruginosa clinical isolates from the bioMérieux collection and the Pirnay collection. These strains contribute to a global view of the phylogenetic distribution, conservation, and potential targets of type I CRISPR-cas systems.

Sample: MLST_235

SAMN04128580 • SRS1167989 • All experiments • All runs

Organism: Pseudomonas aeruginosa

Library:

Name: WH-SGI-V-07406

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward151 reverse

Experiment attributes:

alignment_software: bowtie2 v2.2.2

Runs: 1 run, 3.3M spots, 823.4M bases, 566.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR2939341	3,286,401	823.4M	566.8Mb	2015-11-30

ID:: 2032483

SRA

Sequence Read Archive

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