amplicon sequencing of nifH from Australian waters - SRA

SRX1465975: amplicon sequencing of nifH from Australian waters
3 LS454 (454 GS FLX Titanium) runs: 555,831 spots, 228.2M bases, 532.6Mb downloads

Design: Nested PCR protocol to amplify a 359 bp region of the nifH gene using primers nifH 3 and nifH 4 followed by nifH 1 and nifH 2

Submitted by: University of Technology Sydney

Study: Marine nifH diversity in tropical northern Australia

PRJNA294637 • SRP067061 • All experiments • All runs

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The aim of this study was to characterise the diversity of nitrogen fixing marine bacteria in the oligotrophic oceanic waters surrounding tropical northern Australia.

Sample: nifH amplicon sequencing from environmental metagenome

SAMN04251458 • SRS1195374 • All experiments • All runs

Organism: marine metagenome

Library:

Name: ATC_CS_nifH_amplicon_seq

Instrument: 454 GS FLX Titanium

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: SINGLE

Runs: 3 runs, 555,831 spots, 228.2M bases, 532.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR2976582	205,606	85.2M	199.1Mb	2015-12-12
SRR2976583	268,571	109.8M	256.7Mb	2015-12-12
SRR2988260	81,654	33.3M	76.8Mb	2015-12-12

ID:: 2073926

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