GSM4634156: 5_tak1_24h_rep3; Marchantia polymorpha; RNA-Seq - SRA

SRX8604207: GSM4634156: 5_tak1_24h_rep3; Marchantia polymorpha; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 17.2M spots, 1.7G bases, 755.9Mb downloads

Submitted by: NCBI (GEO)

Study: Time-course RNA-seq analysis of salt resonse in Arabidopsis and Marchantia

PRJNA641427 • SRP268513 • All experiments • All runs

show Abstracthide Abstract

Purpose: To understand the dynamic salt-sress response in Arabidopsis and Marchantia Overall design: 7-day old Arabidopiss seedlings , rice seedlings and Marchantia gemmalings were subjected to 100 mM NaCl for 0, 1, 2, 3, 6, 12, 24,48 and 72 hr, 2-3 biological replicates

Sample: 5_tak1_24h_rep3

SAMN15352680 • SRS6894358 • All experiments • All runs

Organism: Marchantia polymorpha

Library:

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: 1-5: Plant samples were frozen in liquid nitrogen, and followed by RNA extraction using Rneasy Plant Mini Kit (Qiagen); 6: Nuclei was carried out by standard ChIP protocol, pull-down by tagRFP TRAP (Chromotek) 1-5: RNA libraries were prepared for sequencing using standard Illumina protocols; 6: Libraries were prepared according to Illumina's instructions

Experiment attributes:

GEO Accession: GSM4634156

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 17.2M spots, 1.7G bases, 755.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR12076925	17,219,955	1.7G	755.9Mb	2021-05-24

ID:: 11185322

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity