GSM4634109: 2_tak1_3h_rep1; Marchantia polymorpha; RNA-Seq - SRA

SRX8604159: GSM4634109: 2_tak1_3h_rep1; Marchantia polymorpha; RNA-Seq
2 ILLUMINA (Illumina HiSeq 4000) runs: 35.1M spots, 3.5G bases, 1.4Gb downloads

Submitted by: NCBI (GEO)

Study: Time-course RNA-seq analysis of salt resonse in Arabidopsis and Marchantia

PRJNA641427 • SRP268513 • All experiments • All runs

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Purpose: To understand the dynamic salt-sress response in Arabidopsis and Marchantia Overall design: 7-day old Arabidopiss seedlings , rice seedlings and Marchantia gemmalings were subjected to 100 mM NaCl for 0, 1, 2, 3, 6, 12, 24,48 and 72 hr, 2-3 biological replicates

Sample: 2_tak1_3h_rep1

SAMN15352746 • SRS6894311 • All experiments • All runs

Organism: Marchantia polymorpha

Library:

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: 1-5: Plant samples were frozen in liquid nitrogen, and followed by RNA extraction using Rneasy Plant Mini Kit (Qiagen); 6: Nuclei was carried out by standard ChIP protocol, pull-down by tagRFP TRAP (Chromotek) 1-5: RNA libraries were prepared for sequencing using standard Illumina protocols; 6: Libraries were prepared according to Illumina's instructions

Experiment attributes:

GEO Accession: GSM4634109

Links:

NCBI link: NCBI Entrez (gds)

Runs: 2 runs, 35.1M spots, 3.5G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR12076856	17,793,520	1.8G	733.5Mb	2021-05-24
SRR12076857	17,354,918	1.8G	707.7Mb	2021-05-24

ID:: 11185274

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