Transcriptome of diet E (75% NPM) - SRA

SRX381874: Transcriptome of diet E (75% NPM)
1 ILLUMINA (Illumina HiSeq 2500) run: 43.1M spots, 4.4G bases, 2.9Gb downloads

Design: The RNA-seq library was prepared with the Illumina Truseq mRNASeq Sample Preparation Kit

Submitted by: ZF-SCREENS B.V.

Study: Nutritional impact of a novel protein meal on gastrointestinal tract functioning in larval zebrafish Danio rerio: Characterisation of microbial communities and mRNAseq gene expression analysis

PRJNA229446 • SRP033265 • All experiments • All runs

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Zebrafish has been explored as nutritional fish model with the purpose to assess the impact of two dietary inclusion levels of a novel protein meal (NPM) of animal origin on the gastrointestinal tract (GIT) functioning of the developing zebrafish.

Sample: diet E (75% NPM)

SAMN02412521 • SRS506089 • All experiments • All runs

Organism: Danio rerio

Library:

Name: E1

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Spot descriptor:

1 forward52 reverse

Pipeline: show...hide...

Program	Version
HCS	1.2
CASAVA	1.7
CLC Bio assembly cell	4.0.1
assembly_table_rnaseq_Zv9	1
DE Seq	1.0.6

Runs: 1 run, 43.1M spots, 4.4G bases, 2.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR1039573	43,136,351	4.4G	2.9Gb	2014-04-23

ID:: 546433

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