Targeted sequencing of Ficus aculeata - SRA

SRX22460579: Targeted sequencing of Ficus aculeata
1 ILLUMINA (Illumina HiSeq 3000) run: 1.8M spots, 541.5M bases, 172.3Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 9

PRJNA1022030 • SRP471037 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Ficus aculeata

SAMN37583850 • SRS19474583 • All experiments • All runs

Organism: Ficus aculeata

Library:

Name: 268f6def-de59-4d4c-b880-851953750073

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.8M spots, 541.5M bases, 172.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR26761734	1,805,014	541.5M	172.3Mb	2023-11-09

ID:: 30446368

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