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ERX2886960: Illumina MiSeq sequencing; qiita_ptid_5704:10246.VD.I2
1 ILLUMINA (Illumina MiSeq) run: 34,956 spots, 5.3M bases, 3.2Mb downloads

Design: We collected soil samples along two arctic transects in North America, NAAT and Eurasia, EAT. Each transect extends across all five bioclimatic subzones of the Arctic.
Submitted by: University of California San Diego Microbiome Initiative (University of California San Diego Microbiome Init)
Study: The North American Arctic Transect, NAAT and the Eurasian Arctic Transect, EAT
PRJEB29570 • ERP111883 • All experiments • All runs
show Abstracthide Abstract
We collected soil samples along two arctic transects in North America, NAAT and Eurasia, EAT. Each transect extends across all five bioclimatic subzones of the Arctic.
Sample: 10246.VD.I2; Timling_arctic_transects
SAMEA5072149 • ERS2883517 • All experiments • All runs
Organism: soil metagenome
Library:
Name: 10246.VD.I2
Instrument: Illumina MiSeq
Strategy: OTHER
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Construction protocol: Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4
Experiment attributes: (show all 29 attributes...) (hide...)
barcode: CTAATCAGAGTG
center_name: UCSDMI
center_project_name: EMP-Timling
extraction_robot: NA
extractionkit_lot: NA
linker: GT
mastermix_lot: 620338
orig_name: VD.I2
pcr_primers: FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT
plating: NA
primer: GTGTGYCAGCMGCCGCGGTAA
primer_date: 73118
primer_plate: 2
processing_robot: ROBE
project_name: Arctic Transects Soils
run_center: UCSDMI
run_date: 9/26/18
run_prefix: Arctic_Transects_Soils_1-3_Prather_Seawater_SU18_1 (show full text...)(hide...)
Arctic_Transects_Soils_1-3_Prather_Seawater_SU18_1_S1_L001
runid: 180926_M05314_0126_000000000-C4PNL
sample_plate: Arctic_Transects_Soils_Plate_2
sequencing_meth: Sequencing by synthesis
target_gene: 16S rRNA
target_subfragment: V4
tm1000_8_tool: NA
tm300_8_tool: 208484Z
tm50_8_tool: 108364Z
water_lot: RNBG7049
well_description: Arctic_Transects_Soils_Plate_2_VD.I2_D8
well_id: D8
Runs: 1 run, 34,956 spots, 5.3M bases, 3.2Mb
Run# of Spots# of BasesSizePublished
ERR288201134,9565.3M3.2Mb2018-11-09

ID:
6738211

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