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ERX3427082: HiSeq X Ten paired end sequencing
1 ILLUMINA (Illumina HiSeq X Ten) run: 1.5M spots, 453.3M bases, 165.1Mb downloads

Design: Illumina sequencing of library DN520514U:B2, constructed from sample accession ERS2443978 for study accession ERP024601. This is part of an Illumina multiplexed sequencing run (26009_2). This submission includes reads tagged with the sequence TAGCTTGT.
Submitted by: Wellcome Sanger Institute
Study: Baby_Biome_Study_gastrointestinal_bacterial_genomes
show Abstracthide Abstract
The study investigates how early microbe exposure and the developing immune system influence subsequent health and developmental outcomes. Culturing efforts coupled with whole genome sequencing of the gastrointestinal bacteria can address key questions that are computationally non-trivial using shotgun metagenomics alone. This comprehensive gut microbiota-derived bacterial genome collection provides the basis to improve the taxonomic classification resolution of metagenomic analysis, and to allow subsequent in vitro and in vivo experiments on host physiology and gut colonisation process. To get a broad and comprehensive coverage of the gut microbiota, we cultivated bacterial species from human faecal samples on different selectice agar media and broth. Samples are whole-genome sequenced on Illumina X10 150bp PE.
Sample: A01580_21_4
SAMEA4623302 • ERS2443978 • All experiments • All runs
Name: DN520514U:B2
Instrument: Illumina HiSeq X Ten
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Construction protocol: Standard
Runs: 1 run, 1.5M spots, 453.3M bases, 165.1Mb
Run# of Spots# of BasesSizePublished


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