U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ERX3427036: HiSeq X Ten paired end sequencing
1 ILLUMINA (Illumina HiSeq X Ten) run: 993,016 spots, 299.9M bases, 112.5Mb downloads

Design: Illumina sequencing of library DN520489N:H6, constructed from sample accession ERS2295842 for study accession ERP024601. This is part of an Illumina multiplexed sequencing run (25964_2). This submission includes reads tagged with the sequence TTCAGCTC.
Submitted by: Wellcome Sanger Institute
Study: Baby_Biome_Study_gastrointestinal_bacterial_genomes
show Abstracthide Abstract
The study investigates how early microbe exposure and the developing immune system influence subsequent health and developmental outcomes. Culturing efforts coupled with whole genome sequencing of the gastrointestinal bacteria can address key questions that are computationally non-trivial using shotgun metagenomics alone. This comprehensive gut microbiota-derived bacterial genome collection provides the basis to improve the taxonomic classification resolution of metagenomic analysis, and to allow subsequent in vitro and in vivo experiments on host physiology and gut colonisation process. To get a broad and comprehensive coverage of the gut microbiota, we cultivated bacterial species from human faecal samples on different selectice agar media and broth. Samples are whole-genome sequenced on Illumina X10 150bp PE.
Sample: A01653_21
SAMEA104694459 • ERS2295842 • All experiments • All runs
Library:
Name: DN520489N:H6
Instrument: Illumina HiSeq X Ten
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Standard
Runs: 1 run, 993,016 spots, 299.9M bases, 112.5Mb
Run# of Spots# of BasesSizePublished
ERR3403271993,016299.9M112.5Mb2019-06-29

ID:
8443841

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...