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ERX2311723: Illumina MiSeq sequencing; qiita_ptid_4165:11519.NTC2.8F
1 ILLUMINA (Illumina MiSeq) run: 165 spots, 24,750 bases, 41,129b downloads

Design: soils from in and around prairie dog burrows
Submitted by: University of California San Diego Microbiome Initiative (University of California San Diego Microbiome Init)
Study: Prairie dog soils
PRJEB24486 • ERP106314 • All experiments • All runs
show Abstracthide Abstract
Soils sampled around prairie dog burrows in Boulder CO
Sample: 11519.NTC2.8F; prairie_dog_burrow_soil
SAMEA104484244 • ERS2102186 • All experiments • All runs
Organism: metagenome
Library:
Name: 11519.NTC2.8F
Instrument: Illumina MiSeq
Strategy: OTHER
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Construction protocol: Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4
Experiment attributes: (show all 28 attributes...) (hide...)
barcode: AGTTTGCGAGAT
center_name: UCSDMI
center_project_name: Sackett Prairie dog soils EMP
extraction_robot: NA
extractionkit_lot: NA
linker: GT
mastermix_lot: 533142
orig_name: NTC2.8F
pcr_primers: FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT
plating: NA
primer: GTGTGYCAGCMGCCGCGGTAA
primer_date: 10317
primer_plate: 8
processing_robot: RIKE
project_name: Prairie Dog Soils Sackett
run_center: UCSDMI
run_date: 11/20/17
run_prefix: PDS_1-2_S1_L001
sample_plate: Prairie_Dog_Soils_Plate_2
sequencing_meth: Sequencing by synthesis
target_gene: 16S rRNA
target_subfragment: V4
tm1000_8_tool: NA
tm300_8_tool: 311318B
tm50_8_tool: 311426B
water_lot: RNBF7110
well_description: Prairie_Dog_Soils_Plate_2_NTC2.8F_F8
well_id: F8
Runs: 1 run, 165 spots, 24,750 bases, 41,129b
Run# of Spots# of BasesSizePublished
ERR225999716524,75041,129b2018-01-31

ID:
5029601

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