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ERX1708477: Illumina HiSeq 2000 sequencing; qiita_ptid_75:659.NZFACE.R4.control.19.8
1 ILLUMINA (Illumina HiSeq 2000) run: 125,123 spots, 12.1M bases, 11.1Mb downloads

Design: soil sample from Ring 1 of NZ FACE expt . In ring 1 pasture atmosphere is enriched with 475 ppm CO2 throughout photoperiod and throughout photoperiod since 1997. No warming
Submitted by: University of California San Diego Microbiome Initiative (University of California San Diego Microbiome Init)
Study: New Zealand Free Air Carbon dioxide Enrichment soil samples
show Abstracthide Abstract
Rhizosphere soil samples from Rings 1-6 of NZ FACE (New Zealand Free Air Carbon Dioxide Enrichment) experiment. Each ring pasture has an atmosphere that is either enriched with 475 ppm CO2 or ambient atmospheric CO2 throughout the photoperiod and throughout the photoperiod since 1997. Each sample also comes from either an area exposed to warming treatment since 2009 or an area with no warming treatment.
Sample: New Zealand Free Air Carbon dioxide Enrichment, AgResearch; 659.NZFACE.R4.control.19.8
SAMEA4443724 • ERS1355173 • All experiments • All runs
Organism: soil metagenome
Library:
Name: 659.NZFACE.R4.control.19.8
Instrument: Illumina HiSeq 2000
Strategy: OTHER
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Construction protocol: EMP V4 515f,806rbc protocol
Experiment attributes: (show all 17 attributes...) (hide...)
barcode: CAAGGCACAAGG
center_name: ANL
center_project_name: New Zealand Free Air Carbon dioxide Enrichment, Ag (show full text...)(hide...)
New Zealand Free Air Carbon dioxide Enrichment, AgResearch
emp_status: EMP
illumina_technology: HiSeq
linker: GT
pcr_primers: FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT
primer: GTGTGCCAGCMGCCGCGGTAA
run_center: CCME
run_date: 2/15/12
run_prefix: s_3_1_sequences
samp_size: .1,g
sample_center: LBNL
sequencing_meth: sequencing by synthesis
study_center: CCME
target_gene: 16S rRNA
target_subfragment: V4
Runs: 1 run, 125,123 spots, 12.1M bases, 11.1Mb
Run# of Spots# of BasesSizePublished
ERR1638156125,12312.1M11.1Mb2016-09-30

ID:
3221945

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