Targeted sequencing of Dioclea malacocarpa - SRA

SRX22404665: Targeted sequencing of Dioclea malacocarpa
1 ILLUMINA (Illumina HiSeq 3000) run: 813,687 spots, 244.1M bases, 93.8Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Dioclea malacocarpa

SAMN37561723 • SRS19441344 • All experiments • All runs

Organism: Macropsychanthus malacocarpus

Library:

Name: c953ddf2-6a41-4fe1-85d2-e2f86b308c4c

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 813,687 spots, 244.1M bases, 93.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR26704912	813,687	244.1M	93.8Mb	2023-11-07

ID:: 30387133

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