Targeted sequencing of Crataegus invicta - SRA

SRX22457458: Targeted sequencing of Crataegus invicta
1 ILLUMINA (Illumina HiSeq 3000) run: 570,005 spots, 171M bases, 61.3Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 12

PRJNA1022138 • SRP471026 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Crataegus invicta

SAMN37588981 • SRS19471463 • All experiments • All runs

Organism: Crataegus invicta

Library:

Name: 0ff81938-99b8-468d-a7cd-0c50fb4aca4a

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 570,005 spots, 171M bases, 61.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR26758777	570,005	171M	61.3Mb	2023-11-09

ID:: 30443247

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