My Bibliography

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Im J, Micah N, Perkins A, Mei K, Geagan M, Noël P. <i> PixelPrint <sup>4D</sup> </i> : A 3D printing method of fabricating patient-specific deformable CT phantoms for respiratory motion applications. [preprint]. 2024 August. doi: 10.1101/2024.08.02.24311385.

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Lorenzon A, Liu SZ, Jiang X, Gang GJ, Stayman JW, Gang GJ. Joint Material Decomposition and Scatter Estimation for Spectral CT. Conf Proc Int Conf Image Form Xray Comput Tomogr. 2024 Aug;2024:186-189. PubMed PMID: 39268506; PubMed Central PMCID: PMC11391857.

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Jiang X, Gang GJ, Stayman JW. CT Material Decomposition using Spectral Diffusion Posterior Sampling. Conf Proc Int Conf Image Form Xray Comput Tomogr. 2024 Aug;2024:324-327. PubMed PMID: 39301204; PubMed Central PMCID: PMC11412325.

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Liu L, Pasyar P, Liu F, Cao Q, Sandvold O, Sahbaee P, Shinohara R, Litt H, Noël P. Assessing the Stability of Photon-Counting CT: Insights from a Two-Year Longitudinal Study. [preprint]. 2024 June. doi: 10.1101/2024.06.05.24308046.

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Im JY, Halliburton SS, Mei K, Perkins AE, Wong E, Roshkovan L, Sandvold OF, Liu LP, Gang GJ, Noël PB. Patient-derived PixelPrint phantoms for evaluating clinical imaging performance of a deep learning CT reconstruction algorithm. Phys Med Biol. 2024 May 14;69(11). doi: 10.1088/1361-6560/ad3dba. PubMed PMID: 38604190; PubMed Central PMCID: PMC11097966.

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Im J, Halliburton S, Mei K, Perkins A, Wong E, Roshkovan L, Sandvold O, Liu L, Gang G, Noël P. Patient-derived PixelPrint phantoms for evaluating clinical imaging performance of a deep learning CT reconstruction algorithm. Physics in Medicine & Biology. 2024 May; 69(11):115009-. doi: 10.1088/1361-6560/ad3dba.

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Pasyar P, Im J, Mei K, Liu L, Sandvold O, Geagan M, Noël PB. PixelPrint: Generating Patient-Specific Phantoms for Spectral CT using Dual Filament 3D Printing. Proc SPIE Int Soc Opt Eng. 2024 Feb;12925. doi: 10.1117/12.3006512. Epub 2024 May 6. PubMed PMID: 38836185; PubMed Central PMCID: PMC11148765.

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Shunhavanich P, Mei K, Shapira N, Stayman JW, McCollough CH, Gang G, Leng S, Geagan M, Yu L, Noël PB, Hsieh SS. 3D printed phantom with 12 000 submillimeter lesions to improve efficiency in CT detectability assessment. Med Phys. 2024 May;51(5):3265-3274. doi: 10.1002/mp.17064. Epub 2024 Apr 8. PubMed PMID: 38588491; PubMed Central PMCID: PMC11076156.

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Liu LP, Shapira N, Halliburton SS, Meyer S, Perkins A, Litt HI, Kauczor HU, Leiner T, Stiller W, Noël PB. Spectral performance evaluation of a second-generation spectral detector CT. J Appl Clin Med Phys. 2024 Apr;25(4):e14300. doi: 10.1002/acm2.14300. Epub 2024 Feb 22. PubMed PMID: 38386967; PubMed Central PMCID: PMC11005977.

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Sandvold OF, Proksa R, Daerr H, Perkins AE, Brown KM, Shapira N, Koehler T, Stayman JW, Gang GJ, Manjeshwar RM, Noël PB. Hybrid spectral CT system with clinical rapid kVp-switching x-ray tube and dual-layer detector for improved iodine quantification. Proc SPIE Int Soc Opt Eng. 2024 Feb;12925. doi: 10.1117/12.3006451. Epub 2024 Apr 1. PubMed PMID: 38803525; PubMed Central PMCID: PMC11129556.

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Liu LP, Salazar E, Sahbaee P, Litt HI, Noël PB. Dual-source photon-counting CT: impact of residual cross-scatter on quantitative spectral results. Proc SPIE Int Soc Opt Eng. 2024 Feb;12925. doi: 10.1117/12.3006109. Epub 2024 Apr 1. PubMed PMID: 38836184; PubMed Central PMCID: PMC11148727.

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Im JY, Halliburton SS, Mei K, Perkins AE, Wong E, Roshkovan L, Gang GJ, Noël PB. Lifelike PixelPrint phantoms for assessing clinical image quality and dose reduction capabilities of a deep learning CT reconstruction algorithm. Proc SPIE Int Soc Opt Eng. 2024 Feb;12925. doi: 10.1117/12.3006547. Epub 2024 Apr 1. PubMed PMID: 38836183; PubMed Central PMCID: PMC11148728.

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Jiang X, Tivnan M, Zhang X, Stayman JW, Gang GJ. Design Optimization of A Triple-Layer Flat-Panel Detector for Three-Material Decomposition. Proc SPIE Int Soc Opt Eng. 2024 Feb;12925. doi: 10.1117/12.3006385. Epub 2024 Apr 1. PubMed PMID: 39301500; PubMed Central PMCID: PMC11412191.

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Liu LP, Pua R, Rosario-Berrios DN, Sandvold OF, Perkins AE, Cormode DP, Shapira N, Soulen MC, Noël PB. Reproducible spectral CT thermometry with liver-mimicking phantoms for image-guided thermal ablation. Phys Med Biol. 2024 Feb 5;69(4). doi: 10.1088/1361-6560/ad2124. PubMed PMID: 38252974; PubMed Central PMCID: PMC10839467.

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Liu L, Pua R, Rosario-Berrios D, Sandvold O, Perkins A, Cormode D, Shapira N, Soulen M, Noël P. Reproducible spectral CT thermometry with liver-mimicking phantoms for image-guided thermal ablation. Physics in Medicine & Biology. 2024 February; 69(4):045009-. doi: 10.1088/1361-6560/ad2124.

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Rosario-Berríos DN, Pang A, Liu LP, Maidment PSN, Kim J, Yoon S, Nieves LM, Mossburg K, Adezio A, Noel P, Lennon EM, Cormode DP. The effect of the size of gold nanoparticle contrast agents on CT imaging of the gastrointestinal tract and inflammatory bowel disease. bioRxiv. 2024 Jan 23;. doi: 10.1101/2024.01.20.576354. PubMed PMID: 38328034; PubMed Central PMCID: PMC10849472.

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Donuru A, Araki T, Dako F, Dave JK, Perez RP, Xu D, Nachiappan A, Barbosa EM Jr, Noel P, Litt H, Knollman F. Photon-counting detector CT allows significant reduction in radiation dose while maintaining image quality and noise on non-contrast chest CT. Eur J Radiol Open. 2023 Dec;11:100538. doi: 10.1016/j.ejro.2023.100538. eCollection 2023 Dec. PubMed PMID: 38028186; PubMed Central PMCID: PMC10665661.

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Sauter AP, Proksa R, Knipfer A, Reischl S, Braren RF, Nadjiri J, Kopp F, Noël PB, Makowski MR, Rummeny EJ, Fingerle AA. CT-Guided Liver Biopsy: Evaluation of Spectral Data From Dual-Layer Detector CT for Improved Lesion Detection. Cardiovasc Intervent Radiol. 2023 Nov;46(11):1621-1631. doi: 10.1007/s00270-023-03550-7. Epub 2023 Sep 27. PubMed PMID: 37759090; PubMed Central PMCID: PMC10615904.

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Mei K, Pasyar P, Geagan M, Liu LP, Shapira N, Gang GJ, Stayman JW, Noël PB. Design and fabrication of 3D-printed patient-specific soft tissue and bone phantoms for CT imaging. Sci Rep. 2023 Oct 15;13(1):17495. doi: 10.1038/s41598-023-44602-9. PubMed PMID: 37840044; PubMed Central PMCID: PMC10577126.

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Liu LP, Shapira N, Sahbaee P, Gang GJ, Knollman FD, Chen MY, Litt HI, Noël PB. Consistency of spectral results in cardiac dual-source photon-counting CT. Sci Rep. 2023 Sep 9;13(1):14895. doi: 10.1038/s41598-023-41969-7. PubMed PMID: 37689744; PubMed Central PMCID: PMC10492823.

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Tivnan M, Gang GJ, Wang W, Noël P, Sulam J, Webster Stayman J. Tunable neural networks for CT image formation. J Med Imaging (Bellingham). 2023 May;10(3):033501. doi: 10.1117/1.JMI.10.3.033501. Epub 2023 May 4. PubMed PMID: 37151806; PubMed Central PMCID: PMC10157542.

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Shi SQZ, Shapira N, Noël PB, Meyer S. Convolutional neural network-based single-shot speckle tracking for x-ray phase-contrast imaging. ArXiv. 2023 May 3;. PubMed PMID: 37205269; PubMed Central PMCID: PMC10187368.

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Li AT, Noël PB, Shapira N. Automatic bolus tracking in abdominal CT scans with convolutional neural networks. Quant Imaging Med Surg. 2023 May 1;13(5):2780-2790. doi: 10.21037/qims-22-686. Epub 2023 Apr 6. PubMed PMID: 37179937; PubMed Central PMCID: PMC10167470.

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Mei K, Pasyar P, Geagan M, Liu L, Shapira N, Gang G, Stayman J, Noël P. Design and fabrication of 3D-printed patient-specific soft tissue and bone phantoms for CT imaging. [preprint]. 2023 April. doi: 10.1101/2023.04.17.23288689.

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Liu LP, Hwang M, Hung M, Soulen MC, Schaer TP, Shapira N, Noël PB. Non-invasive mass and temperature quantifications with spectral CT. Sci Rep. 2023 Apr 14;13(1):6109. doi: 10.1038/s41598-023-33264-2. PubMed PMID: 37059839; PubMed Central PMCID: PMC10104802.

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Mei K, Roshkovan L, Pasyar P, Shapira N, Gang GJ, Stayman JW, Geagan M, Noël PB. PixelPrint: A collection of three-dimensional printed CT phantoms of different respiratory diseases. Proc SPIE Int Soc Opt Eng. 2023 Feb;12463. doi: 10.1117/12.2654343. Epub 2023 Apr 7. PubMed PMID: 37854299; PubMed Central PMCID: PMC10584041.

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Gang GJ, Stayman JW. Three-material decomposition using a dual-layer flat panel detector in the presence of soft tissue motion. Proc SPIE Int Soc Opt Eng. 2023 Feb;12463. doi: 10.1117/12.2654443. Epub 2023 Apr 7. PubMed PMID: 37854298; PubMed Central PMCID: PMC10583106.

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Jiang X, Stayman JW, Gang GJ. Approaches for Three Material Decomposition using a Triple-Layer Flat-Panel Detector. Proc SPIE Int Soc Opt Eng. 2023 Feb;12463. doi: 10.1117/12.2654468. Epub 2023 Apr 7. PubMed PMID: 37854300; PubMed Central PMCID: PMC10583108.

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Hsieh SS, Mei K, Shapira N, Shunhavanich P, Stayman JW, McCollough CH, Gang G, Leng S, Geagen M, Yu L, Noël PB. A dense search challenge phantom fabricated with pixel-based 3D printing for precise detectability assessment. Proc SPIE Int Soc Opt Eng. 2023 Feb;12463. doi: 10.1117/12.2654336. Epub 2023 Apr 7. PubMed PMID: 39328819; PubMed Central PMCID: PMC11425774.

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Shapira N, Donovan K, Mei K, Geagan M, Roshkovan L, Gang GJ, Abed M, Linna NB, Cranston CP, O'Leary CN, Dhanaliwala AH, Kontos D, Litt HI, Stayman JW, Shinohara RT, Noël PB. Three-dimensional printing of patient-specific computed tomography lung phantoms: a reader study. PNAS Nexus. 2023 Mar;2(3):pgad026. doi: 10.1093/pnasnexus/pgad026. eCollection 2023 Mar. PubMed PMID: 36909822; PubMed Central PMCID: PMC9992761.

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Haghighi B, Horng H, Noël PB, Cohen EA, Pantalone L, Vachani A, Rendle KA, Wainwright J, Saia C, Shinohara RT, Barbosa EM Jr, Kontos D. Radiomic phenotyping of the lung parenchyma in a lung cancer screening cohort. Sci Rep. 2023 Feb 4;13(1):2040. doi: 10.1038/s41598-023-29058-1. PubMed PMID: 36739358; PubMed Central PMCID: PMC9899203.

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Meyer S, Liu LP, Litt HI, Halliburton SS, Shapira N, Noël PB. Phantom-based quantification of the spectral accuracy in dual-layer spectral CT for pediatric imaging at 100 kVp. Quant Imaging Med Surg. 2023 Feb 1;13(2):924-934. doi: 10.21037/qims-22-552. Epub 2023 Jan 2. PubMed PMID: 36819257; PubMed Central PMCID: PMC9929380.

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Shapira N, Bharthulwar S, Noël P. Convolutional Encoder-Decoder Networks for Volumetric Computed Tomography Surviews from Single- and Dual-View Topograms. [preprint]. 2023 January. doi: 10.21203/rs.3.rs-2449089/v1.

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Viermetz M, Gustschin N, Schmid C, Haeusele J, Noel P, Proksa R, Loscher S, Koehler T, Pfeiffer F. Technical Design Considerations of a Human-Scale Talbot-Lau Interferometer for Dark-Field CT. IEEE Transactions on Medical Imaging. 2023 January; 42(1):220-232. doi: 10.1109/TMI.2022.3207579.

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Pua R, Liu L, Dieckmeyer M, Shapira N, Sahbaee P, Gang G, Litt H, Noël P. Impact of patient habitus and acquisition protocol on iodine quantification in dual source photon-counting CT. [preprint]. 2022 December. doi: 10.1101/2022.12.16.22283594.

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Singh A, Horng H, Chitalia R, Roshkovan L, Katz SI, Noël P, Shinohara RT, Kontos D. Resampling and harmonization for mitigation of heterogeneity in image parameters of baseline scans. Sci Rep. 2022 Dec 13;12(1):21505. doi: 10.1038/s41598-022-26083-4. PubMed PMID: 36513760; PubMed Central PMCID: PMC9747915.

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Liu L, Shapira N, Sahbaee P, Gang G, Knollman F, Chen M, Litt H, Noël P. Stability of spectral results in cardiac dual-source photon-counting CT. [preprint]. 2022 December. doi: 10.1101/2022.12.07.22283222.

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Liu LP, Shapira N, Chen AA, Shinohara RT, Sahbaee P, Schnall M, Litt HI, Noël PB. First-generation clinical dual-source photon-counting CT: ultra-low-dose quantitative spectral imaging. Eur Radiol. 2022 Dec;32(12):8579-8587. doi: 10.1007/s00330-022-08933-x. Epub 2022 Jun 16. PubMed PMID: 35708838; PubMed Central PMCID: PMC10071880.

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Horng H, Singh A, Yousefi B, Cohen EA, Haghighi B, Katz S, Noël PB, Kontos D, Shinohara RT. Improved generalized ComBat methods for harmonization of radiomic features. Sci Rep. 2022 Nov 8;12(1):19009. doi: 10.1038/s41598-022-23328-0. PubMed PMID: 36348002; PubMed Central PMCID: PMC9643436.

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Tivnan M, Gang G, Zhang R, Noël P, Sulam J, Stayman JW. Tunable Neural Networks for Multi-Material Image Formation from Spectral CT Measurements. Proc SPIE Int Soc Opt Eng. 2022 Jun;12304. doi: 10.1117/12.2647138. Epub 2022 Oct 17. PubMed PMID: 36329993; PubMed Central PMCID: PMC9627647.

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Liu LP, Shapira N, Sahbaee P, Litt HI, Chen MY, Noël PB. Dual-source photon-counting CT: consistency in spectral results at different acquisition modes and heart rates. Proc SPIE Int Soc Opt Eng. 2022 Jun;12304. doi: 10.1117/12.2646718. Epub 2022 Oct 17. PubMed PMID: 37038393; PubMed Central PMCID: PMC10082999.

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Mei K, Geagan M, Shapira N, Liu LP, Pasyar P, Gang GJ, Stayman JW, Noël PB. PixelPrint: Three-dimensional printing of patient-specific soft tissue and bone phantoms for CT. Proc SPIE Int Soc Opt Eng. 2022 Jun;12304. doi: 10.1117/12.2647008. Epub 2022 Oct 17. PubMed PMID: 36935778; PubMed Central PMCID: PMC10024593.

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Tivnan M, Wang W, Gang G, Stayman JW. Design Optimization of Spatial-Spectral Filters for Cone-Beam CT Material Decomposition. IEEE Trans Med Imaging. 2022 Sep;41(9):2399-2413. doi: 10.1109/TMI.2022.3164568. Epub 2022 Aug 31. PubMed PMID: 35377842; PubMed Central PMCID: PMC9437130.

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Dong Y, Kumar A, Rosario-Berríos D, Si-Mohamed S, Hsu J, Nieves L, Douek P, Noël P, Cormode D. Ytterbium Nanoparticle Contrast Agents for Conventional and Spectral Photon-Counting CT and Their Applications for Hydrogel Imaging. ACS Applied Materials & Interfaces. 2022 August; 14(34):39274-39284. doi: 10.1021/acsami.2c12354.

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Frank M, Urban T, Willer K, Noichl W, De Marco F, Schick R, Gleich B, Schegerer A, Lechel U, Meyer P, Mohr J, Koehler T, Yaroshenko A, Maack I, Pralow T, Proksa R, Renger B, Noël P, Fingerle A, Pfeiffer D, Rummeny E, Herzen J, Pfeiffer F. Erratum: "Dosimetry on first clinical dark-field chest radiography" Med Phys 48(10), 6152-6159. Med Phys. 2022 Jul;49(7):4933-4934. doi: 10.1002/mp.15770. Epub 2022 Jun 6. PubMed PMID: 35666632.

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Li A, Noël P, Shapira N. Automatic Bolus Tracking in Abdominal CT scans with Convolutional Neural Networks. [preprint]. 2022 June. doi: 10.1101/2022.06.29.22276968.

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Singh A, Horng H, Roshkovan L, Weeks JK, Hershman M, Noël P, Luna JM, Cohen EA, Pantalone L, Shinohara RT, Bauml JM, Thompson JC, Aggarwal C, Carpenter EL, Katz SI, Kontos D. Development of a robust radiomic biomarker of progression-free survival in advanced non-small cell lung cancer patients treated with first-line immunotherapy. Sci Rep. 2022 Jun 15;12(1):9993. doi: 10.1038/s41598-022-14160-7. PubMed PMID: 35705618; PubMed Central PMCID: PMC9200843.

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Liu L, Shapira N, Halliburton S, Meyer S, Perkins A, Litt H, Kauczor H, Leiner T, Stiller W, Noël P. Spectral performance evaluation of a second-generation spectral detector CT. [preprint]. 2022 June. doi: 10.1101/2022.06.03.22275935.

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Shapira N, Bharthulwar S, Noël P. Convolutional Encoder-Decoder Networks for Volumetric Computed Tomography Surviews from Single- and Dual-View Topograms. [preprint]. 2022 May. doi: 10.1101/2022.05.17.22275229.

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Shapira N, Donovan K, Mei K, Geagan M, Roshkovan L, Gang G, Abed M, Linna N, Cranston C, O’Leary C, Dhanaliwala A, Kontos D, Litt H, Stayman J, Shinohara R, Noël P. PixelPrint: Three-dimensional printing of realistic patient-specific lung phantoms for validation of computed tomography post-processing and inference algorithms. [preprint]. 2022 May. doi: 10.1101/2022.05.06.22274739.