My Bibliography

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Sun W, Jin C, Gelfond JA, Chen MH, Ibrahim JG. Joint analysis of single-cell and bulk tissue sequencing data to infer intratumor heterogeneity. Biometrics. 2020 Sep;76(3):983-994. doi: 10.1111/biom.13198. Epub 2019 Dec 27. PubMed PMID: 31813161; PubMed Central PMCID: PMC7275921.

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Choi BY, Wang CP, Gelfond J. Machine learning outcome regression improves doubly robust estimation of average causal effects. Pharmacoepidemiol Drug Saf. 2020 Sep;29(9):1120-1133. doi: 10.1002/pds.5074. Epub 2020 Jul 27. PubMed PMID: 32716126; PubMed Central PMCID: PMC8098857.

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Guderyon MJ, Chen C, Bhattacharjee A, Ge G, Fernandez RA, Gelfond JAL, Gorena KM, Cheng CJ, Li Y, Nelson JF, Strong RJ, Hornsby PJ, Clark RA, Li S. Mobilization-based transplantation of young-donor hematopoietic stem cells extends lifespan in mice. Aging Cell. 2020 Mar;19(3):e13110. doi: 10.1111/acel.13110. Epub 2020 Feb 3. PubMed PMID: 32012439; PubMed Central PMCID: PMC7059148.

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Spiller LR, Kellogg ND, Mercado-Deane MG, Zarka AI, Gelfond JAL. Growth recovery lines: a specific indicator of child abuse and neglect?. Pediatr Radiol. 2020 Feb;50(2):207-215. doi: 10.1007/s00247-019-04526-x. Epub 2019 Sep 14. PubMed PMID: 31522259.

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McLaughlin JE, Choi BY, Liu Q, Gelfond JA, Robinson RD, Chang TA, Knudtson JF. Does assisted hatching affect live birth in fresh, first cycle in vitro fertilization in good and poor prognosis patients?. J Assist Reprod Genet. 2019 Dec;36(12):2425-2433. doi: 10.1007/s10815-019-01619-2. Epub 2019 Nov 12. PubMed PMID: 31713775; PubMed Central PMCID: PMC6911124.

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Cheng CJ, Gelfond JAL, Strong R, Nelson JF. Genetically heterogeneous mice exhibit a female survival advantage that is age- and site-specific: Results from a large multi-site study. Aging Cell. 2019 Jun;18(3):e12905. doi: 10.1111/acel.12905. Epub 2019 Feb 23. PubMed PMID: 30801953; PubMed Central PMCID: PMC6516160.

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Harrison DE, Strong R, Alavez S, Astle CM, DiGiovanni J, Fernandez E, Flurkey K, Garratt M, Gelfond JAL, Javors MA, Levi M, Lithgow GJ, Macchiarini F, Nelson JF, Sukoff Rizzo SJ, Slaga TJ, Stearns T, Wilkinson JE, Miller RA. Acarbose improves health and lifespan in aging HET3 mice. Aging Cell. 2019 Apr;18(2):e12898. doi: 10.1111/acel.12898. Epub 2019 Jan 27. PubMed PMID: 30688027; PubMed Central PMCID: PMC6413665.

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McLaughlin JE, Knudtson JF, Schenken RS, Ketchum NS, Gelfond JA, Chang TA, Robinson RD. Business models and provider satisfaction in in vitro fertilization centers in the USA. J Assist Reprod Genet. 2019 Feb;36(2):283-289. doi: 10.1007/s10815-018-1368-1. Epub 2018 Nov 12. PubMed PMID: 30421341; PubMed Central PMCID: PMC6420549.

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Ankerst DP, Goros M, Tomlins SA, Patil D, Feng Z, Wei JT, Sanda MG, Gelfond J, Thompson IM, Leach RJ, Liss MA. Incorporation of Urinary Prostate Cancer Antigen 3 and TMPRSS2:ERG into Prostate Cancer Prevention Trial Risk Calculator. Eur Urol Focus. 2019 Jan;5(1):54-61. doi: 10.1016/j.euf.2018.01.010. Epub 2018 Feb 13. PubMed PMID: 29422418; PubMed Central PMCID: PMC6077104.

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Arora SP, Ketchum NS, Michalek J, Gelfond J, Mahalingam D. Left Versus Right: Does Location Matter for Refractory Metastatic Colorectal Cancer Patients in Phase 1 Clinical Trials?. J Gastrointest Cancer. 2018 Sep;49(3):283-287. doi: 10.1007/s12029-017-9948-3. PubMed PMID: 28432610.

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Kabra A, Gelfond J, Liss MA. Hormonal manipulation with finasteride or oral contraception does not influence incidence of renal cell carcinoma. Eur J Cancer Prev. 2018 Sep;27(5):449-452. doi: 10.1097/CEJ.0000000000000345. PubMed PMID: 28338531; PubMed Central PMCID: PMC5610586.

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Grandhi R, Weiner GM, Agarwal N, Panczykowski DM, Ares WJ, Rodriguez JS, Gelfond JA, Myers JG, Alarcon LH, Okonkwo DO, Jankowitz BT. Limitations of multidetector computed tomography angiography for the diagnosis of blunt cerebrovascular injury. J Neurosurg. 2018 Jun;128(6):1642-1647. doi: 10.3171/2017.2.JNS163264. Epub 2017 Aug 11. PubMed PMID: 28799874.

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Kraig E, Linehan LA, Liang H, Romo TQ, Liu Q, Wu Y, Benavides AD, Curiel TJ, Javors MA, Musi N, Chiodo L, Koek W, Gelfond JAL, Kellogg DL Jr. A randomized control trial to establish the feasibility and safety of rapamycin treatment in an older human cohort: Immunological, physical performance, and cognitive effects. Exp Gerontol. 2018 May;105:53-69. doi: 10.1016/j.exger.2017.12.026. Epub 2018 Feb 3. PubMed PMID: 29408453; PubMed Central PMCID: PMC5869166.

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Weiner M, Gelfond J, Johnson-Pais TL, Engle M, Peloquin CA, Johnson JL, Sizemore EE, Mac Kenzie WR. Elevated Plasma Moxifloxacin Concentrations and SLCO1B1 g.-11187G>A Polymorphism in Adults with Pulmonary Tuberculosis. Antimicrob Agents Chemother. 2018 May;62(5). doi: 10.1128/AAC.01802-17. Print 2018 May. PubMed PMID: 29463526; PubMed Central PMCID: PMC5923103.

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Ross CN, Austad S, Brasky K, Brown CJ, Forney LJ, Gelfond JA, Lanford R, Richardson A, Tardif SD. The development of a specific pathogen free (SPF) barrier colony of marmosets (Callithrix jacchus) for aging research. Aging (Albany NY). 2017 Dec 7;9(12):2544-2558. doi: 10.18632/aging.101340. PubMed PMID: 29227963; PubMed Central PMCID: PMC5764392.

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Lager S, Ramirez VI, Acosta O, Meireles C, Miller E, Gaccioli F, Rosario FJ, Gelfond JAL, Hakala K, Weintraub ST, Krummel DA, Powell TL. Docosahexaenoic Acid Supplementation in Pregnancy Modulates Placental Cellular Signaling and Nutrient Transport Capacity in Obese Women. J Clin Endocrinol Metab. 2017 Dec 1;102(12):4557-4567. doi: 10.1210/jc.2017-01384. PubMed PMID: 29053802; PubMed Central PMCID: PMC5718695.

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Fry CL, Naugle TC Jr, Cole SA, Gelfond J, Chittoor G, Mariani AF, Goros MW, Haik BG, Voruganti VS. The Latino Eyelid: Anthropometric Analysis of a Spectrum of Findings. Ophthalmic Plast Reconstr Surg. 2017 Nov/Dec;33(6):440-445. doi: 10.1097/IOP.0000000000000821. PubMed PMID: 27861404; PubMed Central PMCID: PMC5432423.

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Knudtson JF, Failor CM, Gelfond JA, Goros MW, Chang TA, Schenken RS, Robinson RD. Assisted hatching and live births in first-cycle frozen embryo transfers. Fertil Steril. 2017 Oct;108(4):628-634. doi: 10.1016/j.fertnstert.2017.07.011. Epub 2017 Aug 30. PubMed PMID: 28863938; PubMed Central PMCID: PMC5657587.

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Schmidt S, Goros M, Parsons HM, Saygin C, Wan HD, Shireman PK, Gelfond JAL. Improving Initiation and Tracking of Research Projects at an Academic Health Center: A Case Study. Eval Health Prof. 2017 Sep;40(3):372-379. doi: 10.1177/0163278716669793. Epub 2016 Sep 20. PubMed PMID: 27653774; PubMed Central PMCID: PMC5813810.

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Espeland MA, Crimmins EM, Grossardt BR, Crandall JP, Gelfond JA, Harris TB, Kritchevsky SB, Manson JE, Robinson JG, Rocca WA, Temprosa M, Thomas F, Wallace R, Barzilai N. Clinical Trials Targeting Aging and Age-Related Multimorbidity. J Gerontol A Biol Sci Med Sci. 2017 Mar 1;72(3):355-361. doi: 10.1093/gerona/glw220. PubMed PMID: 28364543; PubMed Central PMCID: PMC5777384.

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Soni NJ, Reyes LF, Keyt H, Arango A, Gelfond JA, Peters JI, Levine SM, Adams SG, Restrepo MI. Use of ultrasound guidance for central venous catheterization: a national survey of intensivists and hospitalists. J Crit Care. 2016 Dec;36:277-283. doi: 10.1016/j.jcrc.2016.07.014. Epub 2016 Jul 17. PubMed PMID: 27491563.

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Dao V, Liu Y, Pandeswara S, Svatek RS, Gelfond JA, Liu A, Hurez V, Curiel TJ. Immune-Stimulatory Effects of Rapamycin Are Mediated by Stimulation of Antitumor γδ T Cells. Cancer Res. 2016 Oct 15;76(20):5970-5982. doi: 10.1158/0008-5472.CAN-16-0091. Epub 2016 Aug 28. PubMed PMID: 27569211; PubMed Central PMCID: PMC5065775.

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Agarwal G, Hirachan P, Gelfond J, Fanti P, Hura C, Bansal S. Ergocalciferol treatment does Not improve erythropoietin utilization and hospitalization rate in hemodialysis patients. BMC Nephrol. 2016 Oct 7;17(1):144. doi: 10.1186/s12882-016-0359-7. PubMed PMID: 27717322; PubMed Central PMCID: PMC5055677.

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Fischer KE, Hoffman JM, Sloane LB, Gelfond JA, Soto VY, Richardson AG, Austad SN. A cross-sectional study of male and female C57BL/6Nia mice suggests lifespan and healthspan are not necessarily correlated. Aging (Albany NY). 2016 Oct 2;8(10):2370-2391. doi: 10.18632/aging.101059. PubMed PMID: 27705904; PubMed Central PMCID: PMC5115894.

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Gelfond J, Dierschke N, Lowe D, Plastino K. Preventing Pregnancy in High School Students: Observations From a 3-Year Longitudinal, Quasi-Experimental Study. Am J Public Health. 2016 Sep;106(S1):S97-S102. doi: 10.2105/AJPH.2016.303379. PubMed PMID: 27689503; PubMed Central PMCID: PMC5049465.

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Ankerst DP, Gelfond J, Goros M, Herrera J, Strobl A, Thompson IM Jr, Hernandez J, Leach RJ. Serial Percent Free Prostate Specific Antigen in Combination with Prostate Specific Antigen for Population Based Early Detection of Prostate Cancer. J Urol. 2016 Aug;196(2):355-60. doi: 10.1016/j.juro.2016.03.011. Epub 2016 Mar 12. PubMed PMID: 26979652; PubMed Central PMCID: PMC4969186.

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Foster BA, Aquino CA, Gil M, Gelfond JA, Hale DE. A Pilot Study of Parent Mentors for Early Childhood Obesity. J Obes. 2016;2016:2609504. doi: 10.1155/2016/2609504. Epub 2016 Jun 9. PubMed PMID: 27379182; PubMed Central PMCID: PMC4917692.

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Melton DW, Lei X, Gelfond JA, Shireman PK. Dynamic macrophage polarization-specific miRNA patterns reveal increased soluble VEGF receptor 1 by miR-125a-5p inhibition. Physiol Genomics. 2016 May;48(5):345-60. doi: 10.1152/physiolgenomics.00098.2015. Epub 2016 Feb 16. PubMed PMID: 26884460; PubMed Central PMCID: PMC4855214.

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Rodriguez KA, Valentine JM, Kramer DA, Gelfond JA, Kristan DM, Nevo E, Buffenstein R. Determinants of rodent longevity in the chaperone-protein degradation network. Cell Stress Chaperones. 2016 May;21(3):453-66. doi: 10.1007/s12192-016-0672-x. Epub 2016 Feb 19. PubMed PMID: 26894765; PubMed Central PMCID: PMC4837185.

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Hurez V, Dao V, Liu A, Pandeswara S, Gelfond J, Sun L, Bergman M, Orihuela CJ, Galvan V, Padrón Á, Drerup J, Liu Y, Hasty P, Sharp ZD, Curiel TJ. Chronic mTOR inhibition in mice with rapamycin alters T, B, myeloid, and innate lymphoid cells and gut flora and prolongs life of immune-deficient mice. Aging Cell. 2015 Dec;14(6):945-56. doi: 10.1111/acel.12380. Epub 2015 Aug 28. PubMed PMID: 26315673; PubMed Central PMCID: PMC4693453.

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Gelfond JA, Ibrahim JG, Chen MH, Sun W, Lewis K, Kinahan S, Hibbs M, Buffenstein R. Homology cluster differential expression analysis for interspecies mRNA-Seq experiments. Stat Appl Genet Mol Biol. 2015 Dec;14(6):507-16. doi: 10.1515/sagmb-2014-0056. PubMed PMID: 26595407.

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Agarwal G, Vasquez K, Penagaluru N, Gelfond J, Qunibi WY. Treatment of vitamin D deficiency/insufficiency with ergocalciferol is associated with reduced vascular access dysfunction in chronic hemodialysis patients. Hemodial Int. 2015 Oct;19(4):499-508. doi: 10.1111/hdi.12292. Epub 2015 Mar 19. PubMed PMID: 25790374.

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Cody JD, Sebold C, Heard P, Carter E, Soileau B, Hasi-Zogaj M, Hill A, Rupert D, Perry B, O'Donnell L, Gelfond J, Lancaster J, Fox PT, Hale DE. Consequences of chromsome18q deletions. Am J Med Genet C Semin Med Genet. 2015 Sep;169(3):265-80. doi: 10.1002/ajmg.c.31446. Epub 2015 Aug 3. Review. PubMed PMID: 26235940.

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Hasi-Zogaj M, Sebold C, Heard P, Carter E, Soileau B, Hill A, Rupert D, Perry B, Atkinson S, O'Donnell L, Gelfond J, Lancaster J, Fox PT, Hale DE, Cody JD. A review of 18p deletions. Am J Med Genet C Semin Med Genet. 2015 Sep;169(3):251-64. doi: 10.1002/ajmg.c.31445. Epub 2015 Aug 6. PubMed PMID: 26250845.

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Bai X, Wey MC, Fernandez E, Hart MJ, Gelfond J, Bokov AF, Rani S, Strong R. Rapamycin improves motor function, reduces 4-hydroxynonenal adducted protein in brain, and attenuates synaptic injury in a mouse model of synucleinopathy. Pathobiol Aging Age Relat Dis. 2015;5:28743. doi: 10.3402/pba.v5.28743. eCollection 2015. PubMed PMID: 26306821; PubMed Central PMCID: PMC4549373.

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Gelfond J, Choate K, Ankerst DP, Hernandez J, Leach RJ, Thompson IM Jr. Intermediate-Term Risk of Prostate Cancer is Directly Related to Baseline Prostate Specific Antigen: Implications for Reducing the Burden of Prostate Specific Antigen Screening. J Urol. 2015 Jul;194(1):46-51. doi: 10.1016/j.juro.2015.02.043. Epub 2015 Feb 14. PubMed PMID: 25686543.

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O'Donnell L, Soileau BT, Sebold C, Gelfond J, Hale DE, Cody JD. Tetrasomy 18p: report of cognitive and behavioral characteristics. Am J Med Genet A. 2015 Jul;167(7):1474-82. doi: 10.1002/ajmg.a.37036. Epub 2015 Apr 21. PubMed PMID: 25900901.

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Cunningham GM, Roman MG, Flores LC, Hubbard GB, Salmon AB, Zhang Y, Gelfond J, Ikeno Y. The paradoxical role of thioredoxin on oxidative stress and aging. Arch Biochem Biophys. 2015 Jun 15;576:32-8. doi: 10.1016/j.abb.2015.02.025. Epub 2015 Feb 26. Review. PubMed PMID: 25726727.

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Fischer KE, Gelfond JA, Soto VY, Han C, Someya S, Richardson A, Austad SN. Health Effects of Long-Term Rapamycin Treatment: The Impact on Mouse Health of Enteric Rapamycin Treatment from Four Months of Age throughout Life. PLoS One. 2015;10(5):e0126644. doi: 10.1371/journal.pone.0126644. eCollection 2015. PubMed PMID: 25978367; PubMed Central PMCID: PMC4433347.

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Melton DW, McManus LM, Gelfond JA, Shireman PK. Temporal phenotypic features distinguish polarized macrophages in vitro. Autoimmunity. 2015 May;48(3):161-76. doi: 10.3109/08916934.2015.1027816. Epub 2015 Mar 31. PubMed PMID: 25826285; PubMed Central PMCID: PMC4681525.

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Meyer AD, Gelfond JA, Wiles AA, Freishtat RJ, Rais-Bahrami K. Platelet-derived microparticles generated by neonatal extracorporeal membrane oxygenation systems. ASAIO J. 2015 Jan-Feb;61(1):37-42. doi: 10.1097/MAT.0000000000000164. PubMed PMID: 25303795; PubMed Central PMCID: PMC4628788.

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Piwkham D, Siriboonpiputtana T, Beuten J, Pakakasama S, Gelfond JA, Paisooksantivatana K, Tomlinson GE, Rerkamnuaychoke B. Mutation Screening and Association Study of the Folylpolyglutamate Synthetase (FPGS) Gene with Susceptibility to Childhood Acute Lymphoblastic Leukemia. Asian Pac J Cancer Prev. 2015;16(11):4727-32. doi: 10.7314/apjcp.2015.16.11.4727. PubMed PMID: 26107232.

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Raphael I, Mahesula S, Purkar A, Black D, Catala A, Gelfond JA, Forsthuber TG, Haskins WE. Microwave & magnetic (M2) proteomics reveals CNS-specific protein expression waves that precede clinical symptoms of experimental autoimmune encephalomyelitis. Sci Rep. 2014 Sep 3;4:6210. doi: 10.1038/srep06210. PubMed PMID: 25182730; PubMed Central PMCID: PMC4152753.

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Egelund EF, Weiner M, Singh RP, Prihoda TJ, Gelfond JA, Derendorf H, Mac Kenzie WR, Peloquin CA. Protein binding of rifapentine and its 25-desacetyl metabolite in patients with pulmonary tuberculosis. Antimicrob Agents Chemother. 2014 Aug;58(8):4904-10. doi: 10.1128/AAC.01730-13. Epub 2014 May 19. PubMed PMID: 24841270; PubMed Central PMCID: PMC4136068.

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Perry BP, Sebold C, Hasi M, Heard P, Carter E, Hill A, Gelfond J, Hale DE, Cody JD. Sensorineural hearing loss in people with deletions of 18q: hearing in 18q-. Otol Neurotol. 2014 Jun;35(5):782-6. doi: 10.1097/MAO.0000000000000363. PubMed PMID: 24662633; PubMed Central PMCID: PMC4170734.

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Evans TM, Van Remmen H, Purkar A, Mahesula S, Gelfond JA, Sabia M, Qi W, Lin AL, Jaramillo CA, Haskins WE. Microwave & Magnetic (M(2)) Proteomics of a Mouse Model of Mild Traumatic Brain Injury. Transl Proteom. 2014 Jun 1;3:10-21. doi: 10.1016/j.trprot.2014.03.002. PubMed PMID: 26157646; PubMed Central PMCID: PMC4492171.

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Weiner M, Savic RM, Kenzie WR, Wing D, Peloquin CA, Engle M, Bliven E, Prihoda TJ, Gelfond JA, Scott NA, Abdel-Rahman SM, Kearns GL, Burman WJ, Sterling TR, Villarino ME. Rifapentine Pharmacokinetics and Tolerability in Children and Adults Treated Once Weekly With Rifapentine and Isoniazid for Latent Tuberculosis Infection. J Pediatric Infect Dis Soc. 2014 Jun;3(2):132-45. doi: 10.1093/jpids/pit077. Epub 2014 Jan 16. PubMed PMID: 26625366.

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Ramirez VI, Miller E, Meireles CL, Gelfond J, Krummel DA, Powell TL. Adiponectin and IGFBP-1 in the development of gestational diabetes in obese mothers. BMJ Open Diabetes Res Care. 2014;2(1):e000010. doi: 10.1136/bmjdrc-2013-000010. eCollection 2014. PubMed PMID: 25452858; PubMed Central PMCID: PMC4212565.

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Weiner M, Egelund EF, Engle M, Kiser M, Prihoda TJ, Gelfond JA, Mac Kenzie W, Peloquin CA. Pharmacokinetic interaction of rifapentine and raltegravir in healthy volunteers. J Antimicrob Chemother. 2014 Apr;69(4):1079-85. doi: 10.1093/jac/dkt483. Epub 2013 Dec 15. PubMed PMID: 24343893; PubMed Central PMCID: PMC4014856.

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Fok WC, Bokov A, Gelfond J, Yu Z, Zhang Y, Doderer M, Chen Y, Javors M, Wood WH 3rd, Zhang Y, Becker KG, Richardson A, Pérez VI. Combined treatment of rapamycin and dietary restriction has a larger effect on the transcriptome and metabolome of liver. Aging Cell. 2014 Apr;13(2):311-9. doi: 10.1111/acel.12175. Epub 2013 Dec 5. PubMed PMID: 24304444; PubMed Central PMCID: PMC3989927.