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    rpoB RNA polymerase subunit beta [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948488, updated on 19-Sep-2024

    Summary

    Official Symbol
    rpoB
    Official Full Name
    RNA polymerase subunit beta
    Primary source
    ECOCYC:EG10894
    Locus tag
    b3987
    See related
    ASAP:ABE-0013041
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3978; ftsR; groN; nitB; rif; ron; sdgB; stl; stv; tabD
    Summary
    HT_Cmplx11_Mem: [More information is available at EcoGene: EG10894]. Along with its ' partner, the subunit of is integrally involved in the enzymatic function of RNA polymerase. [More information is available at EcoCyc: EG10894].
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    Genomic context

    Sequence:
    NC_000913.3 (4181245..4185273)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L10 Neighboring gene 50S ribosomal subunit protein L12 Neighboring gene RNA polymerase subunit beta' Neighboring gene protein YjaZ

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to DNA-directed 5'-3' RNA polymerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ribonucleoside binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in DNA-templated transcription initiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in DNA-templated transcription initiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in bacterial-type flagellum assembly NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in bacterial-type flagellum-dependent cell motility NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in cell motility NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in cellular response to cell envelope stress NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in intracellular iron ion homeostasis NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in nitrate assimilation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in regulation of DNA-templated transcription elongation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in regulation of DNA-templated transcription initiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of DNA-templated transcription initiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to antibiotic IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to heat NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in submerged biofilm formation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in transcription antitermination IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    RNA polymerase subunit beta
    NP_418414.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4181245..4185273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418414.1 RNA polymerase subunit beta [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418414.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0B5HLZ9, A0A0B5HQP6, A0A2X1N431, A0A376FW45, A0A6C9QA67, E1CBR5
      Conserved Domains (1) summary
      PRK00405
      Location:11342
      rpoB; DNA-directed RNA polymerase subunit beta; Reviewed