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    LOC9268570 subtilisin-like protease SBT3.9 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9268570, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9268570
    Gene description
    subtilisin-like protease SBT3.9
    Locus tag
    OSNPB_040120300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9268570 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (1293122..1303481)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (1210979..1219230)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene receptor-like protein 1 Neighboring gene receptor-like protein 56 Neighboring gene subtilisin-like protease SBT3.9 Neighboring gene uncharacterized LOC136356040 Neighboring gene uncharacterized LOC136355977 Neighboring gene subtilisin-like protease SBT3.9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    subtilisin-like protease SBT3.9
    Names
    Os04g0120300
    subtilisin-like protease SBT3.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      1293122..1303481
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066310015.1 → XP_066166112.1  subtilisin-like protease SBT3.9 isoform X1

    2. XM_026024606.2 → XP_025880391.2  subtilisin-like protease SBT3.9 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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