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    vapC8 ribonuclease VapC8 [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 888149, updated on 6-Oct-2023

    Summary

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    Gene symbol
    vapC8
    Gene description
    ribonuclease VapC8
    Locus tag
    Rv0665
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (758801..759139)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene ribonuclease VapC7 Neighboring gene antitoxin VapB7 Neighboring gene arylsulfatase AtsD Neighboring gene antitoxin VapB8 Neighboring gene membrane protein Neighboring gene DNA-directed RNA polymerase subunit beta Neighboring gene DNA-directed RNA polymerase subunit beta'

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ribonuclease VapC8
    NP_215179.1
    • toxin, part of toxin-antitoxin (TA) operon with Rv0664,contains PIN domain. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      758801..759139
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_215179.1 ribonuclease VapC8 [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_215179.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R4M4K1
      Conserved Domains (1) summary
      cl28905
      Location:10 → 108
      PIN_SF; PIN (PilT N terminus) domain: Superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P9WFB1.1

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