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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_003711.4 → NP_003702.2 phospholipid phosphatase 1 isoform 1
See identical proteins and their annotated locations for NP_003702.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also named PAP2-a1) lacks an alternate exon and contains an in-frame alternate exon in the 5' coding region, compared to variant 2. The resulting isoform (1) contains a distinct internal segment and is shorter, compared to isoform 2.
- Source sequence(s)
-
AF014402, BC008787, BC039847, BC143281
- Consensus CDS
-
CCDS34159.1
- UniProtKB/Swiss-Prot
- B7ZKN8, G3XA95, O14494, O60457, O60463, Q17RZ4
- Related
- ENSP00000302229.8, ENST00000307259.9
- Conserved Domains (1) summary
-
- cd03384
Location:98 → 243
- PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
-
NM_176895.3 → NP_795714.1 phospholipid phosphatase 1 isoform 2
See identical proteins and their annotated locations for NP_795714.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also named PAP2-a2) encodes the longer isoform (2).
- Source sequence(s)
-
AF014403, BC008787, BC039847, BC168254
- Consensus CDS
-
CCDS34160.1
- Related
- ENSP00000264775.5, ENST00000264775.9
- Conserved Domains (1) summary
-
- cd03384
Location:99 → 244
- PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
RNA
-
NR_103485.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate exon in the 5' region compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF014402, BC008787, BC039847, BC168254
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
55424854..55534964 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006714724.4 → XP_006714787.1 phospholipid phosphatase 1 isoform X1
- Conserved Domains (1) summary
-
- cd03384
Location:35 → 180
- PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
56252163..56362555 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054353738.1 → XP_054209713.1 phospholipid phosphatase 1 isoform X1