U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TGG1 thioglucoside glucohydrolase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832669, updated on 18-Sep-2024

    Summary

    Official Symbol
    TGG1
    Official Full Name
    thioglucoside glucohydrolase 1
    Primary source
    TAIR:AT5G26000
    Locus tag
    AT5G26000
    See related
    Araport:AT5G26000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTGG1; BETA GLUCOSIDASE 38; BGLU38; THIOGLUCOSIDE GLUCOHYDROLASE; thioglucoside glucohydrolase 1
    Summary
    member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See TGG1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (9079452..9082384, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glucoside glucohydrolase 2 Neighboring gene core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene miscRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_122501.3
    NM_180746.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-glucosidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables thioglucosidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables thioglucosidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables thioglucosidase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables thioglucosidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    thioglucoside glucohydrolase 1
    NP_197972.2
    • thioglucoside glucohydrolase 1 (TGG1); FUNCTIONS IN: thioglucosidase activity, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: glucosinolate catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glucoside glucohydrolase 2 (TAIR:AT5G25980.2); Has 10598 Blast hits to 10348 proteins in 1443 species: Archae - 123; Bacteria - 7528; Metazoa - 688; Fungi - 189; Plants - 1364; Viruses - 0; Other Eukaryotes - 706 (source: NCBI BLink).
    NP_851077.1
    • thioglucoside glucohydrolase 1 (TGG1); FUNCTIONS IN: thioglucosidase activity, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: glucosinolate catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glucoside glucohydrolase 2 (TAIR:AT5G25980.2); Has 11138 Blast hits to 10810 proteins in 1458 species: Archae - 132; Bacteria - 7708; Metazoa - 712; Fungi - 191; Plants - 1422; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9079452..9082384 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180746.3NP_851077.1  thioglucoside glucohydrolase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851077.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DHN6, P37702, Q3E942, Q3V5A7, Q3V5A8, Q3V5A9, Q3V5B1, Q3V5B2, Q3V5B3, Q3V5B4, Q3V5B5, Q3V5B6, Q3V5B7, Q3V5B8, Q3V5B9, Q3V5C0, Q3V5C2, Q3V5C3, Q3V5C4, Q3V5C5, Q3V5C8, Q3V5D1, Q3V5D2, Q8H7H2, Q93Z31, Q940N8
      UniProtKB/TrEMBL
      A0A178U7L7, A0A5S9Y7N4, A0A654G4R0
      Conserved Domains (1) summary
      cl23725
      Location:40511
      Glyco_hydro; Glycosyl hydrolases
    2. NM_122501.3NP_197972.2  thioglucoside glucohydrolase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197972.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y7N4, A0A654G4R0
      Conserved Domains (1) summary
      cl23725
      Location:40448
      Glyco_hydro_1; Glycosyl hydrolase family 1