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    Plant calmodulin-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831395, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant calmodulin-binding protein-like protein
    Primary source
    TAIR:AT5G15430
    Locus tag
    AT5G15430
    See related
    Araport:AT5G15430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20K14.40; T20K14_40
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (5009687..5011856)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene U-box domain-containing protein Neighboring gene Cyclic nucleotide-regulated ion channel family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene EID1-like 1 Neighboring gene casein lytic proteinase B3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Plant calmodulin-binding protein-like protein
    NP_001318567.1
    • Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT5G39380.1); Has 2981 Blast hits to 2520 proteins in 284 species: Archae - 2; Bacteria - 98; Metazoa - 1113; Fungi - 263; Plants - 238; Viruses - 17; Other Eukaryotes - 1250 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5009687..5011856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343400.1 → NP_001318567.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G187, Q9LF39

    2. NM_121547.2 → NP_197047.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197047.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G187, Q9LF39
      Conserved Domains (1) summary
      smart01054
      Location:353 → 468
      CaM_binding; Plant calmodulin-binding domain
    Nucleotide Protein
    Heading Accession and Version

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