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    LOC8288334 zinc finger protein CONSTANS-LIKE 9 [ Ricinus communis (castor bean) ]

    Gene ID: 8288334, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8288334
    Gene description
    zinc finger protein CONSTANS-LIKE 9
    Locus tag
    RCOM_1213200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8288334 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (26285700..26291484)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994445.1 (323949..329850)

    Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8288332 Neighboring gene uncharacterized LOC8288333 Neighboring gene RRP15-like protein Neighboring gene probable E3 ubiquitin-protein ligase XERICO

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein CONSTANS-LIKE 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063262.1 Reference ASM1957865v1

      Range
      26285700..26291484
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002524552.4 → XP_002524598.2  zinc finger protein CONSTANS-LIKE 9 isoform X2

      Conserved Domains (3) summary
      smart00336
      Location:5 → 47
      BBOX; B-Box-type zinc finger
      cd00021
      Location:47 → 90
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:357 → 400
      CCT; CCT motif

    2. XM_048376631.1 → XP_048232588.1  zinc finger protein CONSTANS-LIKE 9 isoform X1

      UniProtKB/TrEMBL
      B9SF29
      Conserved Domains (2) summary
      cd19821
      Location:4 → 47
      Bbox1_BBX-like; B-box-type 1 zinc finger found in B-box (BBX) family of plant transcription factors and similar proteins
      pfam06203
      Location:357 → 400
      CCT; CCT motif

    3. XM_048376632.1 → XP_048232589.1  zinc finger protein CONSTANS-LIKE 9 isoform X3

    4. XM_048376633.1 → XP_048232590.1  zinc finger protein CONSTANS-LIKE 9 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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