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    LOC8287692 potassium channel AKT2/3 [ Ricinus communis (castor bean) ]

    Gene ID: 8287692, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8287692
    Gene description
    potassium channel AKT2/3
    Locus tag
    RCOM_0406880
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 6 NC_063261.1 (15620249..15628600)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994645.1 (25350..33720, complement)

    Chromosome 6 - NC_063261.1Genomic Context describing neighboring genes Neighboring gene putative disease resistance RPP13-like protein 1 Neighboring gene UDP-glucose:glycoprotein glucosyltransferase Neighboring gene uncharacterized LOC8287694 Neighboring gene serine hydroxymethyltransferase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium channel AKT2/3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063261.1 Reference ASM1957865v1

      Range
      15620249..15628600
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002529487.4 → XP_002529533.2  potassium channel AKT2/3

      UniProtKB/TrEMBL
      B9SU64
      Conserved Domains (6) summary
      PLN03192
      Location:26 → 847
      PLN03192; Voltage-dependent potassium channel; Provisional
      cd00038
      Location:406 → 519
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      cd00204
      Location:577 → 700
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam07885
      Location:276 → 330
      Ion_trans_2; Ion channel
      pfam11834
      Location:768 → 839
      KHA; KHA, dimerization domain of potassium ion channel
      sd00045
      Location:583 → 613
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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