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    LOC8268545 organic cation/carnitine transporter 4 [ Ricinus communis (castor bean) ]

    Gene ID: 8268545, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8268545
    Gene description
    organic cation/carnitine transporter 4
    Locus tag
    RCOM_0987060
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8268545 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 9 NC_063264.1 (9084962..9091502)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994745.1 (95570..101944, complement)

    Chromosome 9 - NC_063264.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene premnaspirodiene oxygenase-like Neighboring gene uncharacterized LOC8268544 Neighboring gene uncharacterized LOC8268543

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    organic cation/carnitine transporter 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063264.1 Reference ASM1957865v1

      Range
      9084962..9091502
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002530872.4 → XP_002530918.1  organic cation/carnitine transporter 4

      See identical proteins and their annotated locations for XP_002530918.1

      UniProtKB/TrEMBL
      B9SY49
      Conserved Domains (2) summary
      cd06174
      Location:122 → 503
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      TIGR00898
      Location:40 → 513
      2A0119; cation transport protein
    Nucleotide Protein
    Heading Accession and Version

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