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    MAP1B methionine aminopeptidase 1C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822165, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MAP1B
    Official Full Name
    methionine aminopeptidase 1C
    Primary source
    TAIR:AT3G25740
    Locus tag
    AT3G25740
    See related
    Araport:AT3G25740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAP1C; methionine aminopeptidase 1C; METHIONINE AMINOPEPTIDASE 1C
    Summary
    Encodes a plastid localized methionine aminopeptidase. Formerly called MAP1C, now called MAP1B.
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    Genomic context

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    See MAP1B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (9397784..9399805)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene non-LTR retrolelement reverse transcriptase Neighboring gene ethylene response DNA binding factor 3 Neighboring gene F-box SKIP23-like protein (DUF295) Neighboring gene allene oxide cyclase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional and developmental impact of cytosolic protein N-terminal methionine excision in Arabidopsis. Ross S, et al. Plant Physiol, 2005 Feb. PMID 15681659, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001338764.1
    NM_113473.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables initiator methionyl aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within N-terminal protein amino acid modification TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    methionine aminopeptidase 1C
    NP_189202.1
    • methionine aminopeptidase 1C (MAP1B); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 17328 Blast hits to 17310 proteins in 2820 species: Archae - 492; Bacteria - 11957; Metazoa - 335; Fungi - 201; Plants - 233; Viruses - 0; Other Eukaryotes - 4110 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9397784..9399805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113473.3 → NP_189202.1  methionine aminopeptidase 1C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189202.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FV51, Q9LS05
      UniProtKB/TrEMBL
      A0A178VK08, A0A5S9XG51, A0A654FAP9, Q24JL4
      Conserved Domains (1) summary
      cd01086
      Location:105 → 341
      MetAP1; Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.

    2. NM_001338764.1 → NP_001326796.1  methionine aminopeptidase 1C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHY7, A0A1I9LQD3, A0A384L000
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FV51.2

    Gene LinkOut

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