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    LOC8057767 caffeoylshikimate esterase [ Sorghum bicolor (sorghum) ]

    Gene ID: 8057767, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC8057767
    Gene description
    caffeoylshikimate esterase
    Locus tag
    SORBI_3003G348700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8057767 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 3 NC_012872.2 (66892843..66895011)

    Chromosome 3 - NC_012872.2Genomic Context describing neighboring genes Neighboring gene putative pectate lyase 21 Neighboring gene caffeoylshikimate esterase Neighboring gene UDP-glucuronic acid decarboxylase 1 Neighboring gene dirigent protein 16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012872.2 Chromosome 3 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caffeoylshikimate esterase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012872.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      66892843..66895011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002456557.2 → XP_002456602.1  caffeoylshikimate esterase isoform X1

      See identical proteins and their annotated locations for XP_002456602.1

      UniProtKB/TrEMBL
      A0A1W0W0C1, A0A921RGN0
      Conserved Domains (1) summary
      cl21494
      Location:7 → 299
      Abhydrolase; alpha/beta hydrolases

    2. XM_021457664.1 → XP_021313339.1  caffeoylshikimate esterase isoform X2

      UniProtKB/TrEMBL
      A0A1W0W0C1
      Conserved Domains (1) summary
      cl21494
      Location:7 → 291
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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