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    CD36_81610 chitin transglycosidase, putative [ Candida dubliniensis CD36 ]

    Gene ID: 8047048, updated on 26-Jun-2024

    Summary

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    Gene symbol
    CD36_81610
    Gene description
    chitin transglycosidase, putative
    Locus tag
    CD36_81610
    See related
    FungiDB:CD36_81610; VEuPathDB:CD36_81610
    Gene type
    protein coding
    RNA name
    chitin transglycosidase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Candida dubliniensis CD36 (strain: CD36)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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    Genomic context

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    See CD36_81610 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_012862.1 (385652..387097, complement)

    Chromosome 3 - NC_012862.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase T, putative Neighboring gene alpha subunit of COPI vesicle coatomer complex, putative Neighboring gene vacuolar-sorting protein, putative Neighboring gene mitochondrial respiratory chain complexes assembly protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012862.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans. Jackson AP, et al. Genome Res, 2009 Dec. PMID 19745113, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fungal-type cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in fungal-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    chitin transglycosidase, putative
    glycosidase precursor, putative
    XP_002419106.1
    • Similar to S. cerevisiae UTR2;
      In S. cerevisiae: cell wall protein that functions in the transfer of chitin to beta(1-6)glucan; has a role in cell wall maintenance

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012862.1 Reference assembly

      Range
      385652..387097 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002419061.1 → XP_002419106.1  chitin transglycosidase, putative [Candida dubliniensis CD36]

      See identical proteins and their annotated locations for XP_002419106.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B9WDD9
      Conserved Domains (2) summary
      cd02183
      Location:97 → 305
      GH16_fungal_CRH1_transglycosylase; glycosylphosphatidylinositol-glucanosyltransferase
      cd06923
      Location:28 → 74
      ChtBD1_GH16; Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl hydrolases
    Nucleotide Protein
    Heading Accession and Version

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