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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012641.1 RefSeqGene
- Range
-
5036..271309
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000726.5 → NP_000717.2 voltage-dependent L-type calcium channel subunit beta-4 isoform b
See identical proteins and their annotated locations for NP_000717.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) encodes the longest isoform (b). This isoform has a b-type N-terminus.
- Source sequence(s)
-
AC079790, AC097448, BC075049, T23939
- Consensus CDS
-
CCDS46426.1
- UniProtKB/Swiss-Prot
- A7BJ74, A8K1Y4, B4DG40, O00305, O60515, Q6B000, Q96L40
- UniProtKB/TrEMBL
-
A8K5R3
- Related
- ENSP00000438949.1, ENST00000539935.7
- Conserved Domains (3) summary
-
- cd12043
Location:91 → 158
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:218 → 398
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:50 → 91
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001005746.4 → NP_001005746.1 voltage-dependent L-type calcium channel subunit beta-4 isoform c
See identical proteins and their annotated locations for NP_001005746.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region, compared to variant 2. The resulting isoform (c) has a shorter and distinct N-terminus, compared to isoform b.
- Source sequence(s)
-
AC079790, AC097448, AK316045, T23939
- Consensus CDS
-
CCDS46427.1
- UniProtKB/TrEMBL
-
A8K5R3
- Related
- ENSP00000489677.1, ENST00000638005.1
- Conserved Domains (3) summary
-
- cd12043
Location:73 → 140
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:200 → 380
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:32 → 73
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001005747.4 → NP_001005747.1 voltage-dependent L-type calcium channel subunit beta-4 isoform a
See identical proteins and their annotated locations for NP_001005747.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents use of an alternate promoter and 5' UTR and differs in the 5' coding region, compared to variant 2. The resulting isoform (a) has a shorter and distinct N-terminus, compared to isoform b. This isoform has an a-type N-terminus.
- Source sequence(s)
-
AC068547, AC097448, AK290049, T23939
- Consensus CDS
-
CCDS46428.1
- UniProtKB/TrEMBL
-
A0A1B0GXG0
- Related
- ENSP00000443893.1, ENST00000534999.7
- Conserved Domains (3) summary
-
- cd12043
Location:57 → 124
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:184 → 364
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:16 → 57
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001145798.2 → NP_001139270.1 voltage-dependent L-type calcium channel subunit beta-4 isoform d
See identical proteins and their annotated locations for NP_001139270.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 3' coding region, compared to variant 2. The resulting isoform (d) lacks an internal segment near the C-terminus, compared to isoform b. This isoform has a b-type N-terminus.
- Source sequence(s)
-
AB302276, AC079790, AC097448, T23939
- Consensus CDS
-
CCDS54409.1
- UniProtKB/TrEMBL
-
A0A1B0GTS4
- Related
- ENSP00000201943.5, ENST00000201943.10
- Conserved Domains (3) summary
-
- cd12043
Location:91 → 158
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam12052
Location:50 → 91
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl27059
Location:218 → 371
- Guanylate_kin; Guanylate kinase
-
NM_001320722.3 → NP_001307651.1 voltage-dependent L-type calcium channel subunit beta-4 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) represents use of an alternate promoter and 5' UTR and differs in the 5' coding region, compared to variant 2. The resulting isoform (e) has a shorter and distinct N-terminus, compared to isoform b.
- Source sequence(s)
-
AC068547, AC097448, AK316045, DA082068, DA782833
- Consensus CDS
-
CCDS82522.1
- UniProtKB/TrEMBL
- A0A1B0GTX2, H0Y476
- Related
- ENSP00000490250.1, ENST00000637217.1
- Conserved Domains (3) summary
-
- cd12043
Location:44 → 111
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:171 → 351
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:3 → 44
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001330113.2 → NP_001317042.1 voltage-dependent L-type calcium channel subunit beta-4 isoform f
Status: REVIEWED
- Source sequence(s)
-
AC068547, AC079790, AC097448
- UniProtKB/TrEMBL
-
A0A1B0GVU5
- Related
- ENSP00000489788.1, ENST00000636785.1
-
NM_001330114.2 → NP_001317043.1 voltage-dependent L-type calcium channel subunit beta-4 isoform g
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) represents use of an alternate promoter compared to variant 2.
- Source sequence(s)
-
AC068547, AC097448
- UniProtKB/TrEMBL
-
Q580I4
- Conserved Domains (1) summary
-
- pfam00625
Location:1 → 180
- Guanylate_kin; Guanylate kinase
-
NM_001330115.2 → NP_001317044.1 voltage-dependent L-type calcium channel subunit beta-4 isoform h
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) represents use of an alternate promoter compared to variant 2. The encoded isoform (h) has an a-type N-terminus.
- Source sequence(s)
-
AC068547, AC097448
- Consensus CDS
-
CCDS82523.1
- UniProtKB/TrEMBL
- A0A1B0GTK1, A0A1B0GVU5
- Related
- ENSP00000489732.1, ENST00000637779.1
-
NM_001330116.2 → NP_001317045.1 voltage-dependent L-type calcium channel subunit beta-4 isoform i
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) represents use of an alternate promoter compared to variant 2.
- Source sequence(s)
-
AC068547, AC097448
- Consensus CDS
-
CCDS82521.1
- UniProtKB/TrEMBL
- A0A1B0GTX8, A0A1B0GVU5
- Related
- ENSP00000489883.1, ENST00000638040.1
-
NM_001330117.2 → NP_001317046.1 voltage-dependent L-type calcium channel subunit beta-4 isoform j
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) represents use of an alternate promoter compared to variant 2.
- Source sequence(s)
-
AC068547, AC097448
- Consensus CDS
-
CCDS82520.1
- UniProtKB/TrEMBL
-
A0A1B0GTP5
- Related
- ENSP00000489787.1, ENST00000637284.1
- Conserved Domains (1) summary
-
- pfam00625
Location:32 → 212
- Guanylate_kin; Guanylate kinase
-
NM_001330118.1 → NP_001317047.1 voltage-dependent L-type calcium channel subunit beta-4 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) represents use of an alternate promoter compared to variant 2.
- Source sequence(s)
-
AC068547, AC097448
- Consensus CDS
-
CCDS82522.1
- UniProtKB/TrEMBL
- A0A1B0GTX2, H0Y476
- Related
- ENSP00000390161.2, ENST00000439467.6
- Conserved Domains (3) summary
-
- cd12043
Location:44 → 111
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:171 → 351
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:3 → 44
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
151832771..152099167 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011511797.4 → XP_011510099.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X3
- UniProtKB/TrEMBL
-
A8K5R3
- Conserved Domains (3) summary
-
- cd12043
Location:91 → 158
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam12052
Location:50 → 91
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17190
Location:230 → 336
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
-
XM_047445790.1 → XP_047301746.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X1
- UniProtKB/TrEMBL
-
H0Y476
-
XM_047445791.1 → XP_047301747.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X4
- UniProtKB/TrEMBL
-
A0A1B0GTP5
-
XM_011511796.3 → XP_011510098.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X2
See identical proteins and their annotated locations for XP_011510098.1
- UniProtKB/TrEMBL
-
A0A1B0GTX2
- Conserved Domains (4) summary
-
- cd12043
Location:43 → 110
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:170 → 350
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:2 → 43
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17190
Location:180 → 351
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
-
XM_047445792.1 → XP_047301748.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X5
-
XM_047445794.1 → XP_047301750.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X7
-
XM_047445798.1 → XP_047301754.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X12
- UniProtKB/TrEMBL
- E7DBM8, F8WA06
- Related
- ENSP00000490510.1, ENST00000637491.1
-
XM_047445797.1 → XP_047301753.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X10
-
XM_047445795.1 → XP_047301751.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X8
- Related
- ENSP00000490127.1, ENST00000637309.1
-
XM_017004888.3 → XP_016860377.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X11
- UniProtKB/TrEMBL
-
A0A1B0GWG5
-
XM_047445796.1 → XP_047301752.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X9
-
XM_047445793.1 → XP_047301749.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X6
- Related
- ENSP00000490430.1, ENST00000635904.1
RNA
-
XR_007081584.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
152284205..152568400 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054343822.1 → XP_054199797.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X13
- UniProtKB/Swiss-Prot
- A7BJ74, A8K1Y4, B4DG40, O00305, O60515, Q6B000, Q96L40
-
XM_054343823.1 → XP_054199798.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X1
- UniProtKB/TrEMBL
-
H0Y476
-
XM_054343825.1 → XP_054199800.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X4
- UniProtKB/TrEMBL
-
A0A1B0GTP5
-
XM_054343824.1 → XP_054199799.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X2
-
XM_054343826.1 → XP_054199801.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X5
-
XM_054343828.1 → XP_054199803.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X12
-
XM_054343827.1 → XP_054199802.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X11