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    AAMP angio associated migratory cell protein [ Bos taurus (domestic cattle) ]

    Gene ID: 767919, updated on 4-Oct-2024

    Summary

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    Official Symbol
    AAMPprovided by VGNC
    Official Full Name
    angio associated migratory cell proteinprovided by VGNC
    Primary source
    VGNC:VGNC:25445
    See related
    BGD:BT29432; Ensembl:ENSBTAG00000003927
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See AAMP in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (106293605..106298509, complement)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene actin related protein 2/3 complex subunit 2 Neighboring gene G protein-coupled bile acid receptor 1 Neighboring gene transmembrane BAX inhibitor motif containing 1 Neighboring gene PNKD metallo-beta-lactamase domain containing Neighboring gene uncharacterized LOC104971307 Neighboring gene ciliogenesis associated TTC17 interacting protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extracellular angio-associated migratory cell protein plays a positive role in angiogenesis and is regulated by astrocytes in coculture. Beckner ME, et al. Microvasc Res, 2002 May. PMID 11969303
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC127598

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    angio-associated migratory cell protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076995.2 → NP_001070463.1  angio-associated migratory cell protein

      See identical proteins and their annotated locations for NP_001070463.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102815
      UniProtKB/Swiss-Prot
      Q3SZK1
      UniProtKB/TrEMBL
      A0AAF6YLU7
      Conserved Domains (3) summary
      smart00320
      Location:389 → 427
      WD40; WD40 repeats
      cd00200
      Location:86 → 386
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:137 → 175
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      106293605..106298509 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005202870.5 → XP_005202927.1  angio-associated migratory cell protein isoform X1

      See identical proteins and their annotated locations for XP_005202927.1

      UniProtKB/TrEMBL
      A0AAF6YLU7
      Related
      ENSBTAP00000005126.5, ENSBTAT00000005126.6
      Conserved Domains (3) summary
      smart00320
      Location:390 → 428
      WD40; WD40 repeats
      cd00200
      Location:87 → 387
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:138 → 176
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SZK1.1 GenPept UniProtKB/Swiss-Prot:Q3SZK1

    Gene LinkOut

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